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Aliases : LOC_Os01g70320
Description : SCD2 component of post-Golgi trafficking SCD complex
Gene families : OG0003024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003024_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g70320.1 | |
| Cluster | HCCA: Cluster_143 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00160930 | evm_27.TU.AmTr_v1... | Vesicle trafficking.endomembrane trafficking.post-Golgi... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g014921 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g11624 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g14795 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Als_g23061 | No alias | component *(SCD2)of post-Golgi trafficking SCD complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0225.g058906 | No alias | component *(SCD2)of post-Golgi trafficking SCD complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g32677 | No alias | component *(SCD2)of post-Golgi trafficking SCD complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G080400.1 | Ceric.02G080400 | not classified & original description: pacid=50584965... | 0.06 | OrthoFinder output from all 47 species | |
| Cre03.g161578 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g45493 | No alias | component *(SCD2)of post-Golgi trafficking SCD complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g03993 | No alias | not classified & original description: none | 0.13 | OrthoFinder output from all 47 species | |
| Len_g58694 | No alias | component *(SCD2)of post-Golgi trafficking SCD complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g07311 | No alias | component *(SCD2)of post-Golgi trafficking SCD complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04902 | No alias | component *(SCD2)of post-Golgi trafficking SCD complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g13402 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02262 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c22_21255V3.1 | Pp3c22_21255 | No annotation | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c22_21290V3.1 | Pp3c22_21290 | No annotation | 0.01 | OrthoFinder output from all 47 species | |
| Smo438807 | No alias | Vesicle trafficking.endomembrane trafficking.post-Golgi... | 0.09 | OrthoFinder output from all 47 species | |
| Solyc05g023770.4.1 | Solyc05g023770 | Coiled-coil domain-containing protein SCD2... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g03385 | No alias | component *(SCD2)of post-Golgi trafficking SCD complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e018754_P001 | Zm00001e018754 | SCD2 component of post-Golgi trafficking SCD complex | 0.17 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| CC | GO:0017119 | Golgi transport complex | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030118 | clathrin coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030125 | clathrin vesicle coat | IEP | HCCA |
| CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | HCCA |
| CC | GO:0030132 | clathrin coat of coated pit | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |