LOC_Os01g68750.1 (LOC_Os01g68750)

Aliases : LOC_Os01g68750

Description : large subunit epsilon of AP-4 vacuole cargo adaptor complex

Gene families : OG0004559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004559_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g68750.1
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00117p00120670	evm_27.TU.AmTr_v1...	Vesicle trafficking.endomembrane trafficking.vacuolar...	0.05	OrthoFinder output from all 47 species
AT1G31730	No alias	Adaptin family protein	0.09	OrthoFinder output from all 47 species
Adi_g058351	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.02	OrthoFinder output from all 47 species
Aev_g02590	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.04	OrthoFinder output from all 47 species
Ala_g06245	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.07	OrthoFinder output from all 47 species
Als_g22306	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.04	OrthoFinder output from all 47 species
Aob_g03588	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.04	OrthoFinder output from all 47 species
Azfi_s0048.g030676	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.05	OrthoFinder output from all 47 species
Cba_g13848	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.02	OrthoFinder output from all 47 species
Ceric.09G002800.1	Ceric.09G002800	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.13	OrthoFinder output from all 47 species
Cre06.g310000	No alias	Vesicle trafficking.endomembrane trafficking.vacuolar...	0.05	OrthoFinder output from all 47 species
Dcu_g01987	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.08	OrthoFinder output from all 47 species
Dde_g28708	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.02	OrthoFinder output from all 47 species
Ehy_g19814	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.04	OrthoFinder output from all 47 species
GSVIVT01036887001	No alias	Vesicle trafficking.endomembrane trafficking.vacuolar...	0.13	OrthoFinder output from all 47 species
Lfl_g03471	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.08	OrthoFinder output from all 47 species
MA_10436474g0010	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor complex	0.08	OrthoFinder output from all 47 species
MA_173844g0010	No alias	AP-4 complex subunit epsilon OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_41176g0010	No alias	AP-4 complex subunit epsilon OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Ppi_g03985	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002513	No alias	large subunit epsilon of AP-4 vacuole cargo adaptor...	0.03	OrthoFinder output from all 47 species
Smo170737	No alias	Vesicle trafficking.endomembrane trafficking.vacuolar...	0.08	OrthoFinder output from all 47 species
Solyc08g075310.4.1	Solyc08g075310	large subunit epsilon of AP-4 vacuole cargo adaptor complex	0.16	OrthoFinder output from all 47 species
Zm00001e018853_P002	Zm00001e018853	large subunit epsilon of AP-4 vacuole cargo adaptor complex	0.14	OrthoFinder output from all 47 species
Zm00001e028486_P002	Zm00001e028486	large subunit epsilon of AP-4 vacuole cargo adaptor complex	0.14	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
MF	GO:0008417	fucosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
CC	GO:0030131	clathrin adaptor complex	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	42	594

External Links

No external refs found!

LOC_Os01g68750.1 (LOC_Os01g68750)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation