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  5. LOC_Os01g68370.1

LOC_Os01g68370.1 (ABI3, SIS10, LOC_Os01g68370)


Aliases : ABI3, SIS10, LOC_Os01g68370

Description : transcription factor (LAV-ABI3)


Gene families : OG0001487 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001487_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g68370.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AT1G28300 LEC2 AP2/B3-like transcriptional factor family protein 0.02 OrthoFinder output from all 47 species
AT3G24650 ABI3, SIS10 AP2/B3-like transcriptional factor family protein 0.03 OrthoFinder output from all 47 species
AT3G26790 FUS3 AP2/B3-like transcriptional factor family protein 0.05 OrthoFinder output from all 47 species
Aspi01Gene00966.t1 ABI3, SIS10,... transcription factor *(ABI3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00966.t3 ABI3, SIS10,... transcription factor *(ABI3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013199 ABI3, SIS10 transcription factor *(ABI3) & original description: CDS=1-1908 0.03 OrthoFinder output from all 47 species
MA_147422g0010 FUS3 transcription factor (LAV-ABI3) 0.02 OrthoFinder output from all 47 species
Mp2g08260.1 ABI3, SIS10 transcription factor (LAV-ABI3) 0.02 OrthoFinder output from all 47 species
Ore_g09127 ABI3, SIS10 LAV-ABI3-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18873 ABI3, SIS10 transcription factor *(ABI3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27466 ABI3, SIS10 LAV-ABI3-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33846 ABI3, SIS10 transcription factor *(ABI3) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16616 ABI3, SIS10 transcription factor *(ABI3) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g083590.4.1 ABI3, SIS10,... transcription factor (LAV-ABI3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 538 632
No external refs found!