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  5. LOC_Os01g66710.1

LOC_Os01g66710.1 (LOC_Os01g66710)


Aliases : LOC_Os01g66710

Description : Polygalacturonase OS=Prunus persica (sp|p48979|pglr_prupe : 343.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 212.9)


Gene families : OG0008809 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008809_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g66710.1

Target Alias Description ECC score Gene Family Method Actions
AT1G05650 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G05660 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Solyc08g014540.1.1 Solyc08g014540 Polygalacturonase OS=Prunus persica... 0.02 OrthoFinder output from all 47 species
Solyc12g019120.2.1 Solyc12g019120 Polygalacturonase OS=Prunus persica... 0.02 OrthoFinder output from all 47 species
Solyc12g019140.3.1 Solyc12g019140 Polygalacturonase OS=Prunus persica... 0.04 OrthoFinder output from all 47 species
Solyc12g019220.1.1 Solyc12g019220 Polygalacturonase OS=Prunus persica... 0.03 OrthoFinder output from all 47 species
Solyc12g096750.2.1 Solyc12g096750 Polygalacturonase OS=Prunus persica... 0.02 OrthoFinder output from all 47 species
Zm00001e019002_P001 Zm00001e019002 Polygalacturonase OS=Prunus persica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 56 379
No external refs found!