- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : FLN1, LOC_Os01g63220
Description : PAP6/FLN1 cofactor of plastid-encoded RNA polymerase
Gene families : OG0007280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007280_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00193710 | FLN1,... | Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT3G54090 | FLN1 | fructokinase-like 1 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g024685 | FLN1 | cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g18551 | FLN1 | cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene38593.t1 | FLN1, Aspi01Gene38593 | cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g03197 | FLN1 | cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z102700.1 | FLN1, Ceric.1Z102700 | cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g10345 | FLN1 | cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g02252 | FLN1 | cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_05959 | FLN1 | PAP6/FLN1 cofactor of plastid-encoded RNA polymerase | 0.04 | OrthoFinder output from all 47 species | |
| Gb_07834 | FLN1 | PAP6/FLN1 cofactor of plastid-encoded RNA polymerase | 0.02 | OrthoFinder output from all 47 species | |
| Gb_38659 | FLN1 | PAP6/FLN1 cofactor of plastid-encoded RNA polymerase | 0.02 | OrthoFinder output from all 47 species | |
| MA_175363g0010 | FLN1 | Fructokinase-like 1, chloroplastic OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g17740.1 | FLN1 | PAP6/FLN1 cofactor of plastid-encoded RNA polymerase | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g04266 | FLN1 | cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g34623 | FLN1 | cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16839 | No alias | cofactor of plastid-encoded RNA polymerase *(PAP6/FLN1)... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g011850.4.1 | FLN1, Solyc09g011850 | PAP6/FLN1 cofactor of plastid-encoded RNA polymerase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004559 | alpha-mannosidase activity | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0006013 | mannose metabolic process | IEP | HCCA |
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| MF | GO:0015923 | mannosidase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011611 | PfkB_dom | 192 | 503 |
| No external refs found! |