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  5. LOC_Os01g61990.2

LOC_Os01g61990.2 (ITN1, LOC_Os01g61990)


Aliases : ITN1, LOC_Os01g61990

Description : Ankyrin repeat-containing protein NPR4 OS=Oryza sativa subsp. japonica (sp|a2cir5|npr4_orysj : 848.0)


Gene families : OG0003154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003154_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g61990.2
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00179220 evm_27.TU.AmTr_v1... Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species
AMTR_s00039p00181370 evm_27.TU.AmTr_v1... Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00026260 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00088p00076560 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00146120 evm_27.TU.AmTr_v1... Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G10340 No alias Ankyrin repeat family protein 0.06 OrthoFinder output from all 47 species
AT1G34050 No alias Ankyrin repeat family protein 0.05 OrthoFinder output from all 47 species
AT2G24600 No alias Ankyrin repeat family protein 0.05 OrthoFinder output from all 47 species
AT3G12360 ITN1 Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
AT5G54710 No alias Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
Aev_g02439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025591001 No alias Ankyrin repeat-containing protein At5g02620... 0.05 OrthoFinder output from all 47 species
GSVIVT01025592001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01032614001 ITN1 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01035638001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_06243 ITN1 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_13078 ITN1 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_37031 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10427678g0010 ITN1 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc01g005340.3.1 Solyc01g005340 Ankyrin repeat-containing protein At2g01680... 0.03 OrthoFinder output from all 47 species
Solyc05g054830.3.1 ITN1, Solyc05g054830 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc06g075600.3.1 Solyc06g075600 Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species
Solyc08g014570.3.1 Solyc08g014570 Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species
Solyc08g066760.4.1 Solyc08g066760 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g066770.3.1 Solyc08g066770 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc09g005860.3.1 Solyc09g005860 Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species
Zm00001e010178_P002 Zm00001e010178 Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR026961 PGG_dom 405 511
IPR020683 DUF3447 256 319
IPR020683 DUF3447 189 250
IPR020683 DUF3447 99 175
No external refs found!