LOC_Os01g61780.1 (VHA-A1, LOC_Os01g61780)

Aliases : VHA-A1, LOC_Os01g61780

Description : subunit a of V-type ATPase membrane V0 subcomplex

Gene families : OG0001824 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001824_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g61780.1
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00080p00100430	VHA-A1,...	Solute transport.primary active transport.V-type ATPase...	0.03	OrthoFinder output from all 47 species
AT2G21410	VHA-A2	vacuolar proton ATPase A2	0.02	OrthoFinder output from all 47 species
AT2G28520	VHA-A1	vacuolar proton ATPase A1	0.05	OrthoFinder output from all 47 species
Adi_g018736	VHA-A2	subunit a of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Ala_g04420	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Ala_g11864	VHA-A2	subunit a of V-type ATPase membrane V0 subcomplex &...	0.04	OrthoFinder output from all 47 species
Als_g06369	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.06	OrthoFinder output from all 47 species
Aop_g01823	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Azfi_s0004.g008880	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.05	OrthoFinder output from all 47 species
Azfi_s0548.g076432	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.06	OrthoFinder output from all 47 species
Ceric.21G018800.1	VHA-A2, Ceric.21G018800	subunit a of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000093.146	VHA-A2	V-type proton ATPase subunit a2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Cre04.g220350	VHA-A3	Solute transport.primary active transport.V-type ATPase...	0.02	OrthoFinder output from all 47 species
Dcu_g08240	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.05	OrthoFinder output from all 47 species
GSVIVT01024208001	VHA-A2	Solute transport.primary active transport.V-type ATPase...	0.05	OrthoFinder output from all 47 species
GSVIVT01025116001	VHA-A1	Solute transport.primary active transport.V-type ATPase...	0.04	OrthoFinder output from all 47 species
Len_g12572	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Lfl_g02233	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.09	OrthoFinder output from all 47 species
MA_10436936g0010	VHA-A1	subunit a of V-type ATPase membrane V0 subcomplex	0.03	OrthoFinder output from all 47 species
Msp_g03567	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Nbi_g04395	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Nbi_g09390	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Ore_g25323	VHA-A2	subunit a of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Pir_g20341	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.04	OrthoFinder output from all 47 species
Ppi_g03205	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.05	OrthoFinder output from all 47 species
Sam_g15324	No alias	subunit a of V-type ATPase membrane V0 subcomplex &...	0.04	OrthoFinder output from all 47 species
Smo182335	VHA-A3	Solute transport.primary active transport.V-type ATPase...	0.02	OrthoFinder output from all 47 species
Solyc11g072530.2.1	VHA-A1, Solyc11g072530	subunit a of V-type ATPase membrane V0 subcomplex	0.04	OrthoFinder output from all 47 species
Tin_g04698	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.04	OrthoFinder output from all 47 species
Zm00001e028800_P002	VHA-A1, Zm00001e028800	subunit a of V-type ATPase membrane V0 subcomplex	0.15	OrthoFinder output from all 47 species
Zm00001e038568_P001	VHA-A3, Zm00001e038568	subunit a of V-type ATPase membrane V0 subcomplex	0.11	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	IEA	Interproscan
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	None	Extended
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEA	Interproscan
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
BP	GO:1902600	proton transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	HCCA
MF	GO:0004559	alpha-mannosidase activity	IEP	HCCA
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	HCCA
MF	GO:0005096	GTPase activator activity	IEP	HCCA
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008417	fucosyltransferase activity	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	HCCA
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016409	palmitoyltransferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
BP	GO:1901264	carbohydrate derivative transport	IEP	HCCA
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002490	V-ATPase_116kDa_su	36	810

External Links

No external refs found!

LOC_Os01g61780.1 (VHA-A1, LOC_Os01g61780)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation