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Aliases : LOC_Os01g61120
Description : Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana (sp|q8rwg3|rer6_arath : 783.0)
Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G40400 | No alias | Protein of unknown function (DUF399 and DUF3411) | 0.08 | OrthoFinder output from all 47 species | |
| AT5G12470 | No alias | Protein of unknown function (DUF3411) | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g048192 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g048193 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g02433 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g02541 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g27723 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23936 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g34117 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g01529 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04442 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12949 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene06534.t1 | Aspi01Gene06534 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34266.t1 | Aspi01Gene34266 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0055.g033944 | No alias | not classified & original description: CDS=18-2474 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03217 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.22G078500.1 | Ceric.22G078500 | not classified & original description: pacid=50614469... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.29G029100.1 | Ceric.29G029100 | not classified & original description: pacid=50624979... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000144.104 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000863.14 | No alias | Protein RETICULATA-RELATED 4, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001086.2 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021617.18 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g18040 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g22117 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g02819 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Dde_g06291 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g07732 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g11697 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g22985 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032197001 | No alias | Protein RETICULATA-RELATED 4, chloroplastic... | 0.07 | OrthoFinder output from all 47 species | |
| Len_g11651 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Len_g18505 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g35960 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| MA_10212503g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g08400.1 | No alias | Protein RETICULATA-RELATED 4, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g12361 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g15648 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g02954 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g11767 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g20912 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ore_g37256 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20049 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g38821 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Pnu_g07921 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g08153 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g57518 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Sam_g08338 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35505 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo177305 | No alias | Protein RETICULATA-RELATED 5, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g087750.4.1 | Solyc01g087750 | Protein RETICULATA-RELATED 4, chloroplastic... | 0.12 | OrthoFinder output from all 47 species | |
| Solyc06g050620.3.1 | Solyc06g050620 | Protein RETICULATA-RELATED 6, chloroplastic... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07578 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g13626 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g19385 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e018574_P001 | Zm00001e018574 | Protein RETICULATA-RELATED 4, chloroplastic... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e019415_P003 | Zm00001e019415 | Protein RETICULATA-RELATED 6, chloroplastic... | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0005315 | inorganic phosphate transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0006817 | phosphate ion transport | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | HCCA |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
| MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | HCCA |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0050992 | dimethylallyl diphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0050993 | dimethylallyl diphosphate metabolic process | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| MF | GO:0051745 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| No external refs found! |