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  5. LOC_Os01g60200.1

LOC_Os01g60200.1 (LOC_Os01g60200)


Aliases : LOC_Os01g60200

Description : no hits & (original description: none)


Gene families : OG0002011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g60200.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00181870 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aev_g11290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0276.g061447 No alias not classified & original description: CDS=537-1706 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020592.11 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g07507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_19308 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g31440.1 LOC_Os12g31440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g07826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g048480.3.1 Solyc06g048480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g03928 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027307_P001 Zm00001e027307 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e031964_P001 Zm00001e031964 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!