LOC_Os01g58620.1 (LOC_Os01g58620)


Aliases : LOC_Os01g58620

Description : no hits & (original description: none)


Gene families : OG0001461 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001461_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g58620.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00209p00027350 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G31130 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 OrthoFinder output from all 47 species
Als_g02959 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g14026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G107200.1 Ceric.01G107200 not classified & original description: pacid=50592899... 0.05 OrthoFinder output from all 47 species
Ceric.09G017600.1 Ceric.09G017600 not classified & original description: pacid=50586735... 0.02 OrthoFinder output from all 47 species
Gb_17606 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Lfl_g01407 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g21279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_14222g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_15438g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g08740.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g11726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015325 No alias not classified & original description: CDS=1-996 0.02 OrthoFinder output from all 47 species
Sam_g07773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!