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  5. LOC_Os01g58500.1

LOC_Os01g58500.1 (LOC_Os01g58500)


Aliases : LOC_Os01g58500

Description : no hits & (original description: none)


Gene families : OG0000989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g58500.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT5G45480 No alias Protein of unknown function (DUF594) 0.05 OrthoFinder output from all 47 species
AT5G45530 No alias Protein of unknown function (DUF594) 0.04 OrthoFinder output from all 47 species
Ala_g34202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22608.t1 Aspi01Gene22608 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22609.t1 Aspi01Gene22609 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024670 No alias not classified & original description: CDS=1-2781 0.02 OrthoFinder output from all 47 species
Dac_g40819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010837001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01014447001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01014448001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01014449001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g24050.1 LOC_Os01g24050 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g42080.1 LOC_Os11g42080 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g01886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008125 No alias not classified & original description: CDS=1-2199 0.02 OrthoFinder output from all 47 species
Solyc12g094650.3.1 Solyc12g094650 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Zm00001e036718_P001 Zm00001e036718 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040439_P001 Zm00001e040439 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e040509_P005 Zm00001e040509 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004725 protein tyrosine phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007658 DUF594 617 668
IPR025315 DUF4220 51 405
No external refs found!