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  5. LOC_Os01g56100.1

LOC_Os01g56100.1 (LOC_Os01g56100)


Aliases : LOC_Os01g56100

Description : transcription factor (BSD)


Gene families : OG0002344 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002344_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g56100.1

Target Alias Description ECC score Gene Family Method Actions
AT5G65910 No alias BSD domain-containing protein 0.03 OrthoFinder output from all 47 species
Ceric.36G022400.1 Ceric.36G022400 transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01004312001 No alias RNA biosynthesis.transcriptional activation.BSD... 0.04 OrthoFinder output from all 47 species
Solyc04g077600.3.1 Solyc04g077600 transcription factor (BSD) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005607 BSD_dom 187 242
No external refs found!