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  5. LOC_Os01g52880.1

LOC_Os01g52880.1 (RLP29, AtRLP29, LOC_Os01g52880)


Aliases : RLP29, AtRLP29, LOC_Os01g52880

Description : Receptor like protein 29 OS=Arabidopsis thaliana (sp|q9sjh6|rlp29_arath : 370.0)


Gene families : OG0001645 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001645_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g52880.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00257820 RIC7,... Phytohormones.signalling peptides.CRP... 0.05 OrthoFinder output from all 47 species
AMTR_s00067p00100740 evm_27.TU.AmTr_v1... Piriformospora indica-insensitive protein 2... 0.03 OrthoFinder output from all 47 species
AMTR_s00162p00041240 RLP29, AtRLP29,... Phytohormones.signalling peptides.CRP... 0.09 OrthoFinder output from all 47 species
AT1G13230 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT1G68780 No alias RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G42800 RLP29, AtRLP29 receptor like protein 29 0.04 OrthoFinder output from all 47 species
AT3G25670 No alias Leucine-rich repeat (LRR) family protein 0.14 OrthoFinder output from all 47 species
AT4G28560 RIC7 ROP-interactive CRIB motif-containing protein 7 0.03 OrthoFinder output from all 47 species
Aev_g18995 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20539 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16403 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01011 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05599 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05616 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00592 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04451.t1 Aspi01Gene04451 EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025440 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: CDS=1-1392 0.07 OrthoFinder output from all 47 species
Ceric.02G105900.1 RLP29, AtRLP29,... EPF-peptide co-receptor *(TMM) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.21G076400.1 RLP29, AtRLP29,... EPF-peptide co-receptor *(TMM) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.27G029700.1 Ceric.27G029700 not classified & original description: pacid=50605924... 0.06 OrthoFinder output from all 47 species
Ceric.36G021700.1 RLP29, AtRLP29,... EPF-peptide co-receptor *(TMM) & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g10843 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07456 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25022 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18503 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011974001 No alias Piriformospora indica-insensitive protein 2... 0.02 OrthoFinder output from all 47 species
GSVIVT01021521001 No alias Receptor like protein 29 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g09152 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09468 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
MA_12679g0010 RLP29, AtRLP29 EPF-peptide receptor (TMM) 0.03 OrthoFinder output from all 47 species
MA_128981g0010 No alias Piriformospora indica-insensitive protein 2... 0.04 OrthoFinder output from all 47 species
MA_131671g0010 No alias EPF-peptide receptor (TMM) 0.04 OrthoFinder output from all 47 species
MA_218844g0010 No alias EPF-peptide receptor (TMM) 0.05 OrthoFinder output from all 47 species
Msp_g04579 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06755 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23103 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28173 RLP29, AtRLP29 EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60051 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005652 No alias EPF-peptide co-receptor *(TMM) & original description: CDS=1-1482 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020320 No alias EPF-peptide co-receptor *(TMM) & original description: CDS=1-1380 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020763 RIC7 EPF-peptide co-receptor *(TMM) & original description: CDS=1-1410 0.02 OrthoFinder output from all 47 species
Smo233841 RLP29, AtRLP29 Phytohormones.signalling peptides.CRP... 0.03 OrthoFinder output from all 47 species
Solyc05g009990.4.1 Solyc05g009990 Piriformospora indica-insensitive protein 2... 0.02 OrthoFinder output from all 47 species
Solyc06g069290.3.1 Solyc06g069290 EPF-peptide receptor (TMM) 0.02 OrthoFinder output from all 47 species
Solyc09g072630.3.1 RIC7, Solyc09g072630 Piriformospora indica-insensitive protein 2... 0.08 OrthoFinder output from all 47 species
Solyc10g007830.1.1 RLP29, AtRLP29,... EPF-peptide receptor (TMM) 0.03 OrthoFinder output from all 47 species
Spa_g49861 No alias EPF-peptide co-receptor *(TMM) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027467_P001 RLP29, AtRLP29,... Receptor like protein 29 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e028221_P001 RLP29, AtRLP29,... Receptor like protein 29 OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
Zm00001e032169_P001 RLP29, AtRLP29,... Receptor like protein 29 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 183 204
IPR001611 Leu-rich_rpt 230 289
IPR001611 Leu-rich_rpt 302 362
No external refs found!