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  5. LOC_Os01g52070.1

LOC_Os01g52070.1 (AtLKT1, KC1, KAT3,...)


Aliases : AtLKT1, KC1, KAT3, ATKC1, LOC_Os01g52070

Description : voltage-gated potassium cation channel (AKT/SKOR/GORK)


Gene families : OG0000357 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000357_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g52070.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT4G22200 AKT3, AKT2/3, AKT2, KT2/3 potassium transport 2/3 0.03 OrthoFinder output from all 47 species
LOC_Os01g11250.1 KAT1, LOC_Os01g11250 voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.03 OrthoFinder output from all 47 species
Pir_g26516 SKOR voltage-gated potassium cation channel *(AKT/SKOR/GORK)... 0.04 OrthoFinder output from all 47 species
Solyc10g024360.2.1 AKT3, AKT2/3,... voltage-gated potassium cation channel (AKT/SKOR/GORK) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 369 451
IPR005821 Ion_trans_dom 32 276
IPR021789 KHA_dom 521 591
No external refs found!