LOC_Os01g50960.1 (KELP, LOC_Os01g50960)

Aliases : KELP, LOC_Os01g50960

Description : RNA polymerase II transcriptional coactivator KELP OS=Arabidopsis thaliana (sp|o65155|kelp_arath : 118.0)

Gene families : OG0001404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001404_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g50960.1

Target	Alias	Description	ECC score	Gene Family Method
AT5G09250	KIWI	ssDNA-binding transcriptional regulator	0.03	OrthoFinder output from all 47 species
Adi_g010168	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.02	OrthoFinder output from all 47 species
Ala_g10913	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.04	OrthoFinder output from all 47 species
Ala_g28195	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.03	OrthoFinder output from all 47 species
Dde_g10050	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.03	OrthoFinder output from all 47 species
Dde_g39377	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.02	OrthoFinder output from all 47 species
Mp2g17130.1	KIWI	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Pir_g34714	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.02	OrthoFinder output from all 47 species
Pnu_g00172	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.03	OrthoFinder output from all 47 species
Sam_g26014	No alias	transcriptional co-activator *(KIWI/KELP) involved in...	0.03	OrthoFinder output from all 47 species
Solyc02g061790.4.1	KIWI, Solyc02g061790	RNA polymerase II transcriptional coactivator KIWI...	0.02	OrthoFinder output from all 47 species
Solyc08g082580.3.1	KELP, Solyc08g082580	RNA polymerase II transcriptional coactivator KELP...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	HCCA
CC	GO:0018995	host cellular component	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
CC	GO:0030286	dynein complex	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
CC	GO:0033643	host cell part	IEP	HCCA
CC	GO:0033646	host intracellular part	IEP	HCCA
CC	GO:0033647	host intracellular organelle	IEP	HCCA
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
CC	GO:0042025	host cell nucleus	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014876	DEK_C	5	58
IPR003173	PC4_C	118	167

External Links

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LOC_Os01g50960.1 (KELP, LOC_Os01g50960)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation