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LOC_Os01g50622.1 (LOC_Os01g50622)


Aliases : LOC_Os01g50622

Description : Bifunctional nuclease 1 OS=Oryza sativa subsp. japonica (sp|q5n8j3|bbd1_orysj : 597.0)


Gene families : OG0001063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g50622.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00133450 BBD1, ATBBD1,... Bifunctional nuclease 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G19660 No alias Wound-responsive family protein 0.02 OrthoFinder output from all 47 species
AT1G75380 BBD1, ATBBD1 bifunctional nuclease in basal defense response 1 0.02 OrthoFinder output from all 47 species
Adi_g059475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03113 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09926 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre16.g688302 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g24289 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009760001 No alias Bifunctional nuclease 2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Len_g59697 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03796 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp2g15780.1 BBD1, ATBBD1 Bifunctional nuclease 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g11428 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02503 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33436 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g080700.4.1 Solyc04g080700 Bifunctional nuclease 2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e018013_P001 Zm00001e018013 Bifunctional nuclease 1 OS=Oryza sativa subsp. indica... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003729 Bi_nuclease_dom 136 259
No external refs found!