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  5. LOC_Os01g47280.1

LOC_Os01g47280.1 (LOC_Os01g47280)


Aliases : LOC_Os01g47280

Description : no hits & (original description: none)


Gene families : OG0001460 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001460_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g47280.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g18133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33068.t1 Aspi01Gene33068 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G032400.1 Ceric.04G032400 not classified & original description: pacid=50631382... 0.02 OrthoFinder output from all 47 species
Ceric.24G057800.1 Ceric.24G057800 not classified & original description: pacid=50629764... 0.02 OrthoFinder output from all 47 species
Ehy_g25932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g08850.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g24820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021151 No alias not classified & original description: CDS=1-1038 0.02 OrthoFinder output from all 47 species
Solyc06g073850.1.1 Solyc06g073850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!