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  5. LOC_Os01g47200.1

LOC_Os01g47200.1 (LOC_Os01g47200)


Aliases : LOC_Os01g47200

Description : CASP-like protein 4A3 OS=Arabidopsis thaliana (sp|q84wp5|cspl8_arath : 122.0)


Gene families : OG0007551 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007551_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g47200.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g19807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28151.t1 Aspi01Gene28151 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 253 388
No external refs found!