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  5. LOC_Os01g46510.1

LOC_Os01g46510.1 (LOC_Os01g46510)


Aliases : LOC_Os01g46510

Description : component TWD40 of TPLATE AP-2 co-adaptor complex


Gene families : OG0005180 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005180_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g46510.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00213280 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
AT5G24710 No alias Transducin/WD40 repeat-like superfamily protein 0.17 OrthoFinder output from all 47 species
Adi_g055941 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Aev_g02602 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.06 OrthoFinder output from all 47 species
Ala_g04924 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Als_g28919 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.08 OrthoFinder output from all 47 species
Aop_g31280 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.06 OrthoFinder output from all 47 species
Azfi_s0002.g001553 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Cba_g02738 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Ceric.33G065100.1 Ceric.33G065100 component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Cre12.g535350 No alias No description available 0.07 OrthoFinder output from all 47 species
Dcu_g06508 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.24 OrthoFinder output from all 47 species
Ehy_g07131 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01029823001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.16 OrthoFinder output from all 47 species
Gb_38178 No alias component TWD40 of TPLATE AP-2 co-adaptor complex 0.18 OrthoFinder output from all 47 species
Lfl_g07125 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.14 OrthoFinder output from all 47 species
MA_10432673g0010 No alias component TWD40 of TPLATE AP-2 co-adaptor complex 0.09 OrthoFinder output from all 47 species
MA_10437103g0010 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
MA_17944g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g04690.1 No alias component TWD40 of TPLATE AP-2 co-adaptor complex 0.16 OrthoFinder output from all 47 species
Msp_g15509 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.03 OrthoFinder output from all 47 species
Nbi_g20127 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.06 OrthoFinder output from all 47 species
Ore_g37472 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.02 OrthoFinder output from all 47 species
Pir_g04477 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.04 OrthoFinder output from all 47 species
Sam_g16152 No alias component *(TWD40) of TPLATE AP-2 co-adaptor complex &... 0.05 OrthoFinder output from all 47 species
Smo92496 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.09 OrthoFinder output from all 47 species
Solyc01g102510.4.1 Solyc01g102510 component TWD40 of TPLATE AP-2 co-adaptor complex 0.06 OrthoFinder output from all 47 species
Zm00001e020289_P001 Zm00001e020289 component TWD40 of TPLATE AP-2 co-adaptor complex 0.19 OrthoFinder output from all 47 species
Zm00001e027982_P002 Zm00001e027982 component TWD40 of TPLATE AP-2 co-adaptor complex 0.31 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA

No InterPro domains available for this sequence

No external refs found!