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  5. LOC_Os01g45550.1

LOC_Os01g45550.1 (ATPIN4, PIN4, LOC_Os01g45550)


Aliases : ATPIN4, PIN4, LOC_Os01g45550

Description : auxin transporter (PIN). auxin efflux transporter (PIN)


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g45550.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00241000 PIN5,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00250330 EIR1, WAV6,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
AMTR_s00038p00079560 PIN7, ATPIN7,... Solute transport.carrier-mediated transport.BART... 0.05 OrthoFinder output from all 47 species
AMTR_s00101p00149240 ATPIN1, PIN1,... Solute transport.carrier-mediated transport.BART... 0.05 OrthoFinder output from all 47 species
AT1G23080 PIN7, ATPIN7 Auxin efflux carrier family protein 0.05 OrthoFinder output from all 47 species
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.04 OrthoFinder output from all 47 species
AT1G77110 PIN6 Auxin efflux carrier family protein 0.04 OrthoFinder output from all 47 species
AT5G16530 PIN5 Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.06 OrthoFinder output from all 47 species
Adi_g011681 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g015718 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08758 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13338 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17447 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21847 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g27966 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39537 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26007 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g12472 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16498 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g32966 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52690 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06041 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15414 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18588 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22307.t3 ATPIN1, PIN1,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28763.t1 ATPIN1, PIN1,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0043.g026982 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037837 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0100.g044237 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0215.g058367 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g34640 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38942 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G080600.1 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.09 OrthoFinder output from all 47 species
Ceric.15G035300.1 ATPIN1, PIN1,... auxin efflux transporter *(PIN) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g03399 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08211 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13516 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g14691 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08494 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g17977 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19454 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008430001 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.05 OrthoFinder output from all 47 species
GSVIVT01010025001 PIN6 Solute transport.carrier-mediated transport.BART... 0.05 OrthoFinder output from all 47 species
GSVIVT01011347001 PIN8, ATPIN8 Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
GSVIVT01019110001 PIN5 Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
GSVIVT01019125001 No alias Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
GSVIVT01025748001 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.05 OrthoFinder output from all 47 species
GSVIVT01029266001 EIR1, WAV6,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
GSVIVT01031663001 PIN3, ATPIN3 Solute transport.carrier-mediated transport.BART... 0.08 OrthoFinder output from all 47 species
Gb_02144 ATPIN1, PIN1 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Gb_23207 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Gb_29191 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Gb_37787 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os01g58860.1 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.08 OrthoFinder output from all 47 species
LOC_Os02g50960.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
LOC_Os06g12610.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os06g44970.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 OrthoFinder output from all 47 species
Lfl_g06682 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12533 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19133 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g40526 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10433084g0010 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
MA_61553g0010 PIN3, ATPIN3 auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 OrthoFinder output from all 47 species
MA_61553g0020 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.09 OrthoFinder output from all 47 species
MA_69724g0010 ATPIN1, PIN1 auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Mp3g21660.1 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Msp_g01195 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05421 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07069 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27942 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11165 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g33653 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02383 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07600 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29643 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005827 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011672 PIN6 auxin efflux transporter *(PIN) & original description:... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012005 PIN7, ATPIN7 auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0173.g024457 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g26841 No alias auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Smo119024 EIR1, WAV6,... Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
Smo234325 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
Smo99301 ATPIN4, PIN4 Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
Solyc01g068410.4.1 PIN5, Solyc01g068410 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Solyc06g059730.3.1 PIN6, Solyc06g059730 auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 OrthoFinder output from all 47 species
Solyc07g006900.2.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.09 OrthoFinder output from all 47 species
Solyc10g078370.2.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Solyc10g080880.2.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Spa_g25895 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48925 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05183 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e010118_P004 PIN5, Zm00001e010118 auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
Zm00001e015800_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 OrthoFinder output from all 47 species
Zm00001e019540_P001 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Zm00001e019973_P002 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e020346_P002 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 OrthoFinder output from all 47 species
Zm00001e024071_P002 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 OrthoFinder output from all 47 species
Zm00001e036089_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Zm00001e036414_P001 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e037682_P001 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 491
No external refs found!