Aliases : LOC_Os01g44970
Description : polygalacturonase (PGX1)
Gene families : OG0000452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000452_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00019p00250890 | evm_27.TU.AmTr_v1... | Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase | 0.02 | OrthoFinder output from all 47 species | |
AT1G10640 | No alias | Pectin lyase-like superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
AT1G23460 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT1G56710 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT1G60590 | No alias | Pectin lyase-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT1G80170 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G26610 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g057212 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g32139 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g36775 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g12304 | No alias | EC_3.2 glycosylase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aspi01Gene13416.t1 | Aspi01Gene13416 | EC_3.2 glycosylase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene44829.t1 | Aspi01Gene44829 | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0030.g024436 | No alias | EC_3.2 glycosylase & original description: CDS=1-1320 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0157.g053776 | No alias | EC_3.2 glycosylase & original description: CDS=175-1677 | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0246.g060021 | No alias | EC_3.2 glycosylase & original description: CDS=1-1317 | 0.02 | OrthoFinder output from all 47 species | |
Dac_g11602 | No alias | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g37611 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g43003 | No alias | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g44374 | No alias | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g09828 | No alias | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g15391 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01008062001 | No alias | Polygalacturonase OS=Juniperus ashei | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01017302001 | No alias | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01028189001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01032118001 | QRT2 | Cell wall.pectin.modification and... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01032447001 | No alias | Polygalacturonase At1g48100 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01033303001 | ADPG2, PGAZAT | Cell wall.pectin.modification and... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01033360001 | ADPG2, PGAZAT | Cell wall.pectin.modification and... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01033362001 | ADPG2, PGAZAT | Cell wall.pectin.modification and... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01033364001 | ADPG2, PGAZAT | Cell wall.pectin.modification and... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01038447001 | No alias | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Gb_05788 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g46510.1 | LOC_Os05g46510 | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os08g23790.1 | LOC_Os08g23790 | Exopolygalacturonase (Fragment) OS=Platanus acerifolia... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os11g14400.1 | LOC_Os11g14400 | Polygalacturonase OS=Prunus persica... | 0.04 | OrthoFinder output from all 47 species | |
Len_g23901 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g55532 | No alias | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g17901 | No alias | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g19271 | No alias | EC_3.2 glycosylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10862g0010 | No alias | Probable polygalacturonase At1g80170 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
MA_13282g0010 | No alias | Polygalacturonase OS=Actinidia deliciosa... | 0.02 | OrthoFinder output from all 47 species | |
MA_285723g0010 | No alias | Polygalacturonase OS=Persea americana... | 0.03 | OrthoFinder output from all 47 species | |
MA_90135g0010 | No alias | Polygalacturonase OS=Chamaecyparis obtusa... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g31860 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g06863 | No alias | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g11845 | No alias | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g25481 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g17999 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g64037 | No alias | EC_3.2 glycosylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0002.g001042 | No alias | EC_3.2 glycosylase & original description: CDS=170-1315 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g15323 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo78038 | No alias | Cell wall.pectin.modification and... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g30681 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g19992 | No alias | EC_3.2 glycosylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e006097_P001 | ADPG2, PGAZAT,... | polygalacturonase (QRT2) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e011814_P002 | ADPG2, PGAZAT,... | Polygalacturonase OS=Actinidia deliciosa... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e017465_P001 | Zm00001e017465 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e017565_P001 | Zm00001e017565 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e026160_P001 | Zm00001e026160 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e027946_P001 | Zm00001e027946 | polygalacturonase (PGX1) | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004650 | polygalacturonase activity | IEA | Interproscan |
BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000743 | Glyco_hydro_28 | 169 | 489 |
No external refs found! |