LOC_Os01g43390.1 (HEME1, LOC_Os01g43390)

Aliases : HEME1, LOC_Os01g43390

Description : uroporphyrinogen III decarboxylase

Gene families : OG0002087 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002087_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g43390.1

Target	Alias	Description	ECC score	Gene Family Method
Aev_g03127	HEME2	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Cre02.g073700	HEME2	Coenzyme metabolism.tetrapyrrol...	0.01	OrthoFinder output from all 47 species
Cre02.g076300	HEME1	Coenzyme metabolism.tetrapyrrol...	0.01	OrthoFinder output from all 47 species
Cre11.g467700	HEME2	Coenzyme metabolism.tetrapyrrol...	0.01	OrthoFinder output from all 47 species
Dcu_g15483	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01032710001	HEME2	Coenzyme metabolism.tetrapyrrol...	0.02	OrthoFinder output from all 47 species
Ore_g26062	HEME1	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014871	HEME1	EC_4.1 carbon-carbon lyase & original description: CDS=111-1343	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017290	HEME2	EC_4.1 carbon-carbon lyase & original description: CDS=109-1317	0.03	OrthoFinder output from all 47 species
Sam_g06891	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Smo231982	HEME1	Coenzyme metabolism.tetrapyrrol...	0.03	OrthoFinder output from all 47 species
Zm00001e001594_P001	HEME2, Zm00001e001594	uroporphyrinogen III decarboxylase	0.02	OrthoFinder output from all 47 species
Zm00001e027900_P001	HEME1, Zm00001e027900	uroporphyrinogen III decarboxylase	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000257	Uroporphyrinogen_deCOase	46	383

External Links

No external refs found!

LOC_Os01g43390.1 (HEME1, LOC_Os01g43390)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation