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  5. LOC_Os01g42700.2

LOC_Os01g42700.2 (LOC_Os01g42700)


Aliases : LOC_Os01g42700

Description : no hits & (original description: none)


Gene families : OG0001124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g42700.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00208080 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT3G25910 No alias Protein of unknown function (DUF1644) 0.03 OrthoFinder output from all 47 species
Adi_g060447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g006700.3.1 Solyc12g006700 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g04796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020682_P002 Zm00001e020682 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR012866 DUF1644 52 207
No external refs found!