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  5. LOC_Os01g36950.1

LOC_Os01g36950.1 (LOC_Os01g36950)


Aliases : LOC_Os01g36950

Description : B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 252.0)


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g36950.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00224090 evm_27.TU.AmTr_v1... B2 protein OS=Daucus carota 0.04 OrthoFinder output from all 47 species
AT5G42050 No alias DCD (Development and Cell Death) domain protein 0.07 OrthoFinder output from all 47 species
Adi_g022798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g050313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g071576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25533 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18482.t1 Aspi01Gene18482 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69799.t1 Aspi01Gene69799 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g18538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G074500.1 Ceric.16G074500 not classified & original description: pacid=50590002... 0.04 OrthoFinder output from all 47 species
Ceric.19G027100.1 Ceric.19G027100 not classified & original description: pacid=50576178... 0.02 OrthoFinder output from all 47 species
Dac_g36991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22847 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08855 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo105781 No alias B2 protein OS=Daucus carota 0.02 OrthoFinder output from all 47 species
Solyc08g008370.3.1 Solyc08g008370 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 291.0) 0.03 OrthoFinder output from all 47 species
Solyc08g082610.4.1 Solyc08g082610 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 303.0) 0.04 OrthoFinder output from all 47 species
Spa_g04970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027710_P001 Zm00001e027710 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 266.0) 0.09 OrthoFinder output from all 47 species
Zm00001e042309_P001 Zm00001e042309 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 219 340
No external refs found!