Aliases : PGP11, LOC_Os01g34970
Description : subfamily ABCB transporter
Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00049p00128080 | evm_27.TU.AmTr_v1... | Putative multidrug resistance protein OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species | |
AT3G28860 | ABCB19,... | ATP binding cassette subfamily B19 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g087129 | No alias | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g16048 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g19030 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g24610 | PGP1, ABCB1, ATPGP1 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g14003 | PGP2 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene08446.t1 | PGP11, Aspi01Gene08446 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene08469.t1 | PGP11, Aspi01Gene08469 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene15961.t1 | ABCB19,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene20594.t1 | PGP20, Aspi01Gene20594 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene20595.t1 | PGP20, Aspi01Gene20595 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene52651.t1 | PGP2, Aspi01Gene52651 | subfamily ABCB transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0010.g012029 | ABCB19,... | subfamily ABCB transporter & original description: CDS=121-4035 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0039.g026389 | PGP11 | subfamily ABCB transporter & original description: CDS=323-4378 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0203.g057675 | ABCB19,... | subfamily ABCB transporter & original description: CDS=1-3912 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0230.g059155 | No alias | not classified & original description: CDS=1-966 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s2496.g111845 | ABCB19,... | subfamily ABCB transporter & original description: CDS=142-3066 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g59935 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.10G028600.1 | PGP20, Ceric.10G028600 | subfamily ABCB transporter & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000572.4 | ATPGP4, PGP4, ABCB4, MDR4 | ABC transporter B family member 4 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Dac_g43354 | ABCB19,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g13730 | No alias | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Gb_08702 | No alias | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
Len_g12070 | PGP13 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g41280 | PGP11 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_102299g0010 | No alias | Putative multidrug resistance protein OS=Oryza sativa... | 0.03 | OrthoFinder output from all 47 species | |
MA_11459g0010 | No alias | Putative multidrug resistance protein OS=Oryza sativa... | 0.04 | OrthoFinder output from all 47 species | |
MA_1824g0020 | No alias | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
MA_3437g0010 | No alias | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species | |
MA_8519205g0010 | PGP17 | ABC transporter B family member 17 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
MA_93218g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Mp2g02920.1 | ABCB19,... | auxin efflux transporter (ABCB19). subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
Ore_g38310 | PGP13 | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g07564 | PGP20 | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g03992 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g04001 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0015.g006646 | PGP20 | subfamily ABCB transporter & original description: CDS=24-3872 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0043.g012919 | ABCB19,... | subfamily ABCB transporter & original description: CDS=118-4143 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0080.g017899 | PGP11 | subfamily ABCB transporter & original description: CDS=362-4450 | 0.05 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0080.g017905 | PGP11 | not classified & original description: CDS=139-861 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0141.g022750 | PGP11 | subfamily ABCB transporter & original description: CDS=1-3756 | 0.02 | OrthoFinder output from all 47 species | |
Smo169182 | ATPGP4, PGP4, ABCB4, MDR4 | Solute transport.primary active transport.ABC... | 0.03 | OrthoFinder output from all 47 species | |
Smo410515 | ABCB19,... | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
Smo99885 | No alias | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g098840.3.1 | PGP11, Solyc12g098840 | subfamily ABCB transporter | 0.02 | OrthoFinder output from all 47 species | |
Tin_g06701 | ABCB19,... | subfamily ABCB transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g46427 | ATPGP4, PGP4, ABCB4, MDR4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e017444_P002 | PGP21, Zm00001e017444 | subfamily ABCB transporter | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0016887 | ATP hydrolysis activity | IEA | Interproscan |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
CC | GO:0016459 | myosin complex | IEP | HCCA |
MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
MF | GO:0043531 | ADP binding | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
No external refs found! |