LOC_Os01g33080.1 (LOC_Os01g33080)


Aliases : LOC_Os01g33080

Description : fimbrin actin-crosslinking factor


Gene families : OG0001639 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g33080.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00167620 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.04 OrthoFinder output from all 47 species
Aob_g15891 No alias fimbrin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013286 FIM1, ATFIM1 fimbrin actin-crosslinking factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0732.g084102 FIM5, FIM2 fimbrin actin-crosslinking factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g05634 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01030417001 FIM5, FIM2 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Gb_01810 FIM5, FIM2 fimbrin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g37580.1 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.04 OrthoFinder output from all 47 species
MA_168655g0010 FIM5, FIM2 fimbrin actin-crosslinking factor 0.05 OrthoFinder output from all 47 species
Smo156878 FIM1, ATFIM1 Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
Smo233006 FIM5, FIM2 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Solyc06g083070.3.1 Solyc06g083070 fimbrin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Tin_g04688 FIM5, FIM2 fimbrin acTin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014968_P001 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001715 CH_dom 302 404
IPR001715 CH_dom 429 532
IPR001715 CH_dom 551 654
IPR001715 CH_dom 186 271
No external refs found!