LOC_Os01g29409.1 (LOC_Os01g29409)

Aliases : LOC_Os01g29409

Description : tRNA guanosine-methyltransferase (TRM5)

Gene families : OG0002428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002428_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g29409.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00072p00056850	evm_27.TU.AmTr_v1...	RNA processing.RNA modification.rRNA/tRNA...	0.02	OrthoFinder output from all 47 species
Dde_g13096	No alias	tRNA guanine-methyltransferase *(TRM5) & original...	0.02	OrthoFinder output from all 47 species
Lfl_g10033	No alias	tRNA guanine-methyltransferase *(TRM5) & original...	0.02	OrthoFinder output from all 47 species
Pir_g47455	No alias	tRNA guanine-methyltransferase *(TRM5) & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0003333	amino acid transmembrane transport	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006865	amino acid transport	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:1903825	organic acid transmembrane transport	IEP	HCCA
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR030382	MeTrfase_TRM5/TYW2	309	505

External Links

No external refs found!