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  5. LOC_Os01g25484.1

LOC_Os01g25484.1 (ATHNIR, NIR1, NIR,...)


Aliases : ATHNIR, NIR1, NIR, LOC_Os01g25484

Description : nitrite reductase


Gene families : OG0004859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004859_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g25484.1
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00132p00099120 ATHNIR, NIR1,... Nutrient uptake.nitrogen assimilation.nitrate... 0.03 OrthoFinder output from all 47 species
AT2G15620 ATHNIR, NIR1, NIR nitrite reductase 1 0.04 OrthoFinder output from all 47 species
Aspi01Gene18379.t1 ATHNIR, NIR1,... EC_1.7 oxidoreductase acting on other nitrogenous... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020941.42 ATHNIR, NIR1, NIR Ferredoxin--nitrite reductase, chloroplastic... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020941.43 ATHNIR, NIR1, NIR Ferredoxin--nitrite reductase, chloroplastic... 0.01 OrthoFinder output from all 47 species
Cre09.g410750 ATHNIR, NIR1, NIR Nutrient uptake.nitrogen assimilation.nitrate... 0.02 OrthoFinder output from all 47 species
Dac_g01701 ATHNIR, NIR1, NIR EC_1.7 oxidoreductase acting on other nitrogenous... 0.03 OrthoFinder output from all 47 species
Ehy_g04922 ATHNIR, NIR1, NIR EC_1.7 oxidoreductase acting on other nitrogenous... 0.03 OrthoFinder output from all 47 species
Len_g26686 ATHNIR, NIR1, NIR not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_105262g0010 ATHNIR, NIR1, NIR no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_142030g0010 ATHNIR, NIR1, NIR nitrite reductase 0.03 OrthoFinder output from all 47 species
MA_188288g0010 ATHNIR, NIR1, NIR Ferredoxin--nitrite reductase, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_188288g0020 ATHNIR, NIR1, NIR Ferredoxin--nitrite reductase, chloroplastic (Fragment)... 0.06 OrthoFinder output from all 47 species
Mp3g24720.1 ATHNIR, NIR1, NIR nitrite reductase 0.02 OrthoFinder output from all 47 species
Msp_g24097 ATHNIR, NIR1, NIR EC_1.7 oxidoreductase acting on other nitrogenous... 0.03 OrthoFinder output from all 47 species
Pp3c27_6610V3.1 ATHNIR, NIR1,... nitrite reductase 1 0.01 OrthoFinder output from all 47 species
Solyc10g050890.2.1 ATHNIR, NIR1,... nitrite reductase 0.03 OrthoFinder output from all 47 species
Zm00001e015948_P001 ATHNIR, NIR1,... nitrite reductase 0.03 OrthoFinder output from all 47 species
Zm00001e023815_P001 ATHNIR, NIR1,... nitrite reductase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008308 voltage-gated monoatomic anion channel activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
CC GO:0019008 molybdopterin synthase complex IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR005117 NiRdtase/SiRdtase_haem-b_fer 422 485
IPR005117 NiRdtase/SiRdtase_haem-b_fer 134 199
IPR006067 NO2/SO3_Rdtase_4Fe4S_dom 209 351
IPR006067 NO2/SO3_Rdtase_4Fe4S_dom 503 611
No external refs found!