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  5. LOC_Os01g24950.1

LOC_Os01g24950.1 (SEC15B, LOC_Os01g24950)


Aliases : SEC15B, LOC_Os01g24950

Description : component SEC15 of Exocyst complex


Gene families : OG0003385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003385_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g24950.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AT4G02350 SEC15B exocyst complex component sec15B 0.03 OrthoFinder output from all 47 species
Ceric.11G016800.1 SEC15A, Ceric.11G016800 component *(SEC15) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Dcu_g06403 SEC15A component *(SEC15) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Dcu_g07091 SEC15A component *(SEC15) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01028035001 SEC15B Vesicle trafficking.target membrane tethering.Exocyst... 0.03 OrthoFinder output from all 47 species
MA_61434g0010 SEC15A component SEC15 of Exocyst complex 0.03 OrthoFinder output from all 47 species
Sam_g09025 No alias component *(SEC15) of Exocyst complex & original... 0.04 OrthoFinder output from all 47 species
Zm00001e017613_P002 SEC15B, Zm00001e017613 component SEC15 of Exocyst complex 0.06 OrthoFinder output from all 47 species
Zm00001e026277_P001 SEC15B, Zm00001e026277 component SEC15 of Exocyst complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEA Interproscan
BP GO:0006904 vesicle docking involved in exocytosis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR007225 EXOC6/Sec15 455 764
No external refs found!