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Aliases : LOC_Os01g24530
Description : no hits & (original description: none)
Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g24530.1 | |
| Cluster | HCCA: Cluster_5 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os01g04140.1 | LOC_Os01g04140 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g18200.1 | LOC_Os01g18200 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os01g19070.1 | LOC_Os01g19070 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os01g19960.1 | LOC_Os01g19960 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os01g29710.1 | LOC_Os01g29710 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g33630.1 | LOC_Os01g33630 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g34360.1 | LOC_Os01g34360 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os01g35254.1 | ZAR1, LOC_Os01g35254 | Putative disease resistance protein RGA3 OS=Solanum... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g36400.1 | LOC_Os01g36400 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g36766.1 | LOC_Os01g36766 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g38810.1 | LOC_Os01g38810 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g63320.1 | LOC_Os01g63320 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g63530.1 | LOC_Os01g63530 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g70030.1 | LOC_Os01g70030 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os01g71910.1 | LOC_Os01g71910 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g74210.1 | LOC_Os01g74210 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g15330.1 | LOC_Os02g15330 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g17110.1 | LOC_Os02g17110 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g25560.1 | LOC_Os02g25560 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os02g30750.1 | LOC_Os02g30750 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g37620.1 | LOC_Os02g37620 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g37730.1 | LOC_Os02g37730 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os03g07680.1 | LOC_Os03g07680 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g25200.1 | LOC_Os03g25200 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g30080.1 | LOC_Os03g30080 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os03g31910.1 | LOC_Os03g31910 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g03710.1 | LOC_Os04g03710 | Subtilisin-like protease SBT3.10 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g05720.1 | LOC_Os04g05720 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g06100.1 | LOC_Os04g06100 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g07170.1 | LOC_Os04g07170 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g07930.1 | LOC_Os04g07930 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g11410.1 | LOC_Os04g11410 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os04g19000.1 | LOC_Os04g19000 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g22840.1 | LOC_Os04g22840 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os04g25590.1 | LOC_Os04g25590 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g26360.1 | LOC_Os04g26360 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g28650.1 | LOC_Os04g28650 | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os04g29440.1 | LOC_Os04g29440 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g29820.1 | LOC_Os04g29820 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os04g34820.1 | LOC_Os04g34820 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g34850.1 | LOC_Os04g34850 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g44010.1 | LOC_Os04g44010 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g03950.1 | LOC_Os05g03950 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g10230.1 | LOC_Os05g10230 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os05g14000.1 | LOC_Os05g14000 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os05g14460.1 | LOC_Os05g14460 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os05g14560.1 | LOC_Os05g14560 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g18900.1 | LOC_Os05g18900 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os05g18990.1 | LOC_Os05g18990 | no hits & (original description: none) | 0.14 | OrthoFinder output from all 47 species | |
| LOC_Os05g19700.1 | LOC_Os05g19700 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g26100.1 | LOC_Os05g26100 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g27860.1 | LOC_Os05g27860 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os05g48100.1 | LOC_Os05g48100 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g48110.1 | LOC_Os05g48110 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g50880.1 | LOC_Os05g50880 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g10380.1 | LOC_Os06g10380 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os06g15050.1 | LOC_Os06g15050 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g15340.1 | LOC_Os06g15340 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os06g21150.1 | LOC_Os06g21150 | no hits & (original description: none) | 0.14 | OrthoFinder output from all 47 species | |
| LOC_Os06g27900.1 | LOC_Os06g27900 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g35350.1 | LOC_Os06g35350 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g42500.1 | LOC_Os06g42500 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g03350.1 | LOC_Os07g03350 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os07g03440.1 | LOC_Os07g03440 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g09540.1 | LOC_Os07g09540 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g11430.1 | LOC_Os07g11430 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os07g11850.1 | LOC_Os07g11850 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g17510.1 | LOC_Os07g17510 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os07g25160.1 | LOC_Os07g25160 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g30750.1 | LOC_Os07g30750 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os07g32750.1 | LOC_Os07g32750 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os07g34090.1 | LOC_Os07g34090 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os07g39610.1 | LOC_Os07g39610 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g46120.1 | LOC_Os07g46120 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os08g04850.1 | LOC_Os08g04850 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g08310.1 | LOC_Os08g08310 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g08670.1 | LOC_Os08g08670 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g12280.1 | LOC_Os08g12280 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os08g16080.1 | LOC_Os08g16080 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g24250.1 | LOC_Os08g24250 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g26280.1 | LOC_Os08g26280 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g01900.1 | LOC_Os09g01900 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g03040.1 | LOC_Os09g03040 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g04200.1 | LOC_Os09g04200 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g06700.1 | LOC_Os09g06700 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g07330.1 | LOC_Os09g07330 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g09060.1 | LOC_Os09g09060 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g09150.1 | LOC_Os09g09150 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os09g11060.1 | LOC_Os09g11060 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g13360.1 | LOC_Os09g13360 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g13560.1 | LOC_Os09g13560 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g13660.1 | LOC_Os09g13660 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g14260.1 | LOC_Os09g14260 | Glutathione S-transferase T3 OS=Arabidopsis thaliana... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os09g15610.1 | LOC_Os09g15610 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g18370.1 | LOC_Os09g18370 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os09g20450.1 | LOC_Os09g20450 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g25240.1 | LOC_Os09g25240 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os10g06660.1 | LOC_Os10g06660 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g07562.1 | LOC_Os10g07562 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os10g08360.1 | LOC_Os10g08360 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os10g08370.1 | LOC_Os10g08370 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g08650.1 | LOC_Os10g08650 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os10g12539.1 | LOC_Os10g12539 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g16800.1 | LOC_Os10g16800 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g19326.1 | LOC_Os10g19326 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g33480.1 | LOC_Os10g33480 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g03950.1 | LOC_Os11g03950 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g14350.1 | LOC_Os11g14350 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os11g24870.1 | LOC_Os11g24870 | no hits & (original description: none) | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os11g26070.1 | LOC_Os11g26070 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os11g31180.1 | LOC_Os11g31180 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os11g35762.1 | LOC_Os11g35762 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g41050.1 | LOC_Os11g41050 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g44100.1 | LOC_Os11g44100 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os12g03770.1 | LOC_Os12g03770 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g11600.1 | LOC_Os12g11600 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g14200.1 | LOC_Os12g14200 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g16400.1 | LOC_Os12g16400 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os12g19210.1 | LOC_Os12g19210 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os12g23240.1 | LOC_Os12g23240 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os12g24680.1 | LOC_Os12g24680 | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os12g28740.1 | LOC_Os12g28740 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os12g31980.1 | LOC_Os12g31980 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g33060.1 | PIN5, LOC_Os12g33060 | auxin transporter (PIN). auxin efflux transporter (PIN) | 0.13 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0015074 | DNA integration | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |