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Aliases : LOC_Os01g24200
Description : no hits & (original description: none)
Gene families : OG0003407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003407_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g24200.1 | |
| Cluster | HCCA: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os01g20170.1 | LOC_Os01g20170 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g22140.1 | LOC_Os01g22140 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os01g29850.1 | LOC_Os01g29850 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g19240.1 | LOC_Os02g19240 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os02g21720.1 | LOC_Os02g21720 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g30390.1 | LOC_Os02g30390 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g36090.1 | LOC_Os02g36090 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g45810.1 | LOC_Os03g45810 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g04100.1 | LOC_Os04g04100 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g21360.1 | LOC_Os04g21360 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g14410.1 | LOC_Os05g14410 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g14850.1 | LOC_Os05g14850 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os05g25170.1 | LOC_Os05g25170 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g15010.1 | LOC_Os06g15010 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os06g19510.1 | LOC_Os06g19510 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os08g16340.1 | LOC_Os08g16340 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g17730.1 | LOC_Os08g17730 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os08g17740.1 | LOC_Os08g17740 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os08g28760.1 | LOC_Os08g28760 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g14770.1 | LOC_Os09g14770 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os11g15430.1 | LOC_Os11g15430 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g16630.1 | LOC_Os11g16630 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os11g25630.1 | LOC_Os11g25630 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g30740.1 | LOC_Os11g30740 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g15950.1 | LOC_Os12g15950 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os12g29630.1 | LOC_Os12g29630 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| BP | GO:0006417 | regulation of translation | IEP | HCCA |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| BP | GO:0017148 | negative regulation of translation | IEP | HCCA |
| MF | GO:0030597 | RNA glycosylase activity | IEP | HCCA |
| MF | GO:0030598 | rRNA N-glycosylase activity | IEP | HCCA |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034249 | negative regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051248 | negative regulation of protein metabolic process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |