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  5. LOC_Os01g24050.1

LOC_Os01g24050.1 (LOC_Os01g24050)


Aliases : LOC_Os01g24050

Description : no hits & (original description: none)


Gene families : OG0000989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g24050.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Adi_g060828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22608.t1 Aspi01Gene22608 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22609.t1 Aspi01Gene22609 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_18623 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g58500.1 LOC_Os01g58500 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g72380.1 LOC_Os01g72380 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g06900.1 LOC_Os04g06900 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g07250.1 LOC_Os04g07250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g01520.1 LOC_Os07g01520 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g01840.1 LOC_Os07g01840 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g09570.1 LOC_Os08g09570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g53565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010447 No alias not classified & original description: CDS=1-2712 0.02 OrthoFinder output from all 47 species
Zm00001e040509_P005 Zm00001e040509 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007658 DUF594 643 687
IPR025315 DUF4220 51 457
No external refs found!