1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g23620.1

LOC_Os01g23620.1 (SAR2, ATSARA1C,...)


Aliases : SAR2, ATSARA1C, ATSAR2, ASAR1, LOC_Os01g23620

Description : GTPase (Sar1)


Gene families : OG0001158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001158_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g23620.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00037810 SAR2, ATSARA1C,... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
AT1G56330 SAR1, ATSAR1B,... secretion-associated RAS 1B 0.05 OrthoFinder output from all 47 species
Adi_g042572 SAR1, ATSAR1B,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060321 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078481 SAR1, ATSAR1B,... small GTPase *(Sar1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10072 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03082 No alias small GTPase *(Sar1) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14905 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G056300.1 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G011200.1 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g16065 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11260 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07272 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11081 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27076 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g02610 No alias small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02669 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.04 OrthoFinder output from all 47 species
Mp2g15910.1 SAR2, ATSARA1C,... GTPase (Sar1) 0.04 OrthoFinder output from all 47 species
Ore_g07262 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g07263 SAR1, ATSAR1B,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35445 No alias small GTPase *(Sar1) & original description: none 0.02 OrthoFinder output from all 47 species
Smo179259 SAR2, ATSARA1C,... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
Solyc01g060130.3.1 Solyc01g060130 GTPase (Sar1) 0.03 OrthoFinder output from all 47 species
Solyc01g079535.1.1 SAR2, ATSARA1C,... GTPase (Sar1) 0.09 OrthoFinder output from all 47 species
Spa_g40971 SAR2, ATSARA1C,... small GTPase *(Sar1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017591_P001 SAR2, ATSARA1C,... GTPase (Sar1) 0.02 OrthoFinder output from all 47 species
Zm00001e026263_P001 SAR2, ATSARA1C,... GTPase (Sar1) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
CC GO:0009349 riboflavin synthase complex IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 8 192
No external refs found!