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  5. LOC_Os01g21850.1

LOC_Os01g21850.1 (LOC_Os01g21850)


Aliases : LOC_Os01g21850

Description : no hits & (original description: none)


Gene families : OG0006423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006423_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g21850.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00173280 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Als_g11002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre10.g447350 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 742 803
IPR006896 Sec23/24_trunk_dom 267 494
IPR006895 Znf_Sec23_Sec24 186 218
IPR012990 Sec23_24_beta_S 512 603
IPR006900 Sec23/24_helical_dom 617 712
No external refs found!