LOC_Os01g19880.1 (LOC_Os01g19880)


Aliases : LOC_Os01g19880

Description : no hits & (original description: none)


Gene families : OG0000091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000091_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g19880.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00054880 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00043220 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00057p00042470 evm_27.TU.AmTr_v1... No description available 0.14 OrthoFinder output from all 47 species
AMTR_s00105p00148840 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00105p00150760 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT1G29195 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT1G76600 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
AT3G03280 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT3G50800 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Adi_g012199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23035 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g23563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05356 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26864 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g30806 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g49714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50190 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g57803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58261 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g14847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g16363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18876 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g19659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01054.t1 Aspi01Gene01054 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene34873.t1 Aspi01Gene34873 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene36870.t1 Aspi01Gene36870 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36873.t1 Aspi01Gene36873 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36874.t1 Aspi01Gene36874 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36885.t1 Aspi01Gene36885 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36890.t1 Aspi01Gene36890 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36907.t1 Aspi01Gene36907 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36924.t1 Aspi01Gene36924 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36927.t1 Aspi01Gene36927 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36930.t1 Aspi01Gene36930 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36975.t1 Aspi01Gene36975 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68687.t1 Aspi01Gene68687 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68688.t1 Aspi01Gene68688 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68692.t1 Aspi01Gene68692 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene68693.t1 Aspi01Gene68693 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68696.t1 Aspi01Gene68696 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68698.t1 Aspi01Gene68698 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68702.t1 Aspi01Gene68702 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68716.t1 Aspi01Gene68716 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68758.t1 Aspi01Gene68758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0083.g038858 No alias not classified & original description: CDS=1-924 0.04 OrthoFinder output from all 47 species
Cba_g59869 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g59870 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.13G010500.1 Ceric.13G010500 not classified & original description: pacid=50635479... 0.06 OrthoFinder output from all 47 species
Ceric.14G027400.1 Ceric.14G027400 not classified & original description: pacid=50633616... 0.04 OrthoFinder output from all 47 species
Ceric.14G096600.1 Ceric.14G096600 not classified & original description: pacid=50634393... 0.06 OrthoFinder output from all 47 species
Ceric.14G096700.1 Ceric.14G096700 not classified & original description: pacid=50634186... 0.04 OrthoFinder output from all 47 species
Ceric.14G096800.1 Ceric.14G096800 not classified & original description: pacid=50633991... 0.07 OrthoFinder output from all 47 species
Ceric.14G097000.1 Ceric.14G097000 not classified & original description: pacid=50633954... 0.04 OrthoFinder output from all 47 species
Ceric.14G097100.1 Ceric.14G097100 not classified & original description: pacid=50633776... 0.04 OrthoFinder output from all 47 species
Ceric.14G097200.1 Ceric.14G097200 not classified & original description: pacid=50634613... 0.03 OrthoFinder output from all 47 species
Ceric.16G044800.1 Ceric.16G044800 not classified & original description: pacid=50590057... 0.05 OrthoFinder output from all 47 species
Ceric.16G045200.1 Ceric.16G045200 not classified & original description: pacid=50588981... 0.03 OrthoFinder output from all 47 species
Ceric.1Z035600.1 Ceric.1Z035600 not classified & original description: pacid=50602495... 0.02 OrthoFinder output from all 47 species
Ceric.20G062700.1 Ceric.20G062700 not classified & original description: pacid=50567245... 0.04 OrthoFinder output from all 47 species
Ceric.24G013000.1 Ceric.24G013000 not classified & original description: pacid=50629345... 0.04 OrthoFinder output from all 47 species
Ceric.26G065000.1 Ceric.26G065000 not classified & original description: pacid=50598973... 0.05 OrthoFinder output from all 47 species
Ceric.26G065100.1 Ceric.26G065100 not classified & original description: pacid=50599287... 0.03 OrthoFinder output from all 47 species
Ceric.28G002300.1 Ceric.28G002300 not classified & original description: pacid=50570721... 0.03 OrthoFinder output from all 47 species
Ceric.29G014700.1 Ceric.29G014700 not classified & original description: pacid=50624719... 0.05 OrthoFinder output from all 47 species
Dac_g05506 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g15976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27477 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g34282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37617 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43546 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g14258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g40249 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03872 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04660 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g10660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19106 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19107 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g21830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31299 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01013456001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01028106001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_05758 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_05762 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_05765 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_05766 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_06364 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_35301 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_35304 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_35305 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_41646 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g09970.1 LOC_Os02g09970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g09990.1 LOC_Os02g09990 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g18660.1 LOC_Os03g18660 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g19260.1 LOC_Os03g19260 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g52940.1 LOC_Os03g52940 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g55880.1 LOC_Os03g55880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g41940.1 LOC_Os06g41940 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g48680.1 LOC_Os06g48680 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g10094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21646 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23370 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g35642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22448 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g24640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10165933g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10296634g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10427270g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10428693g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10432844g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_112931g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_120551g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_120628g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_147379g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_152921g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_224816g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_24094g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_27857g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_31046g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_390260g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_495117g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_4985671g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_59045g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_76101g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7767108g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_87298g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_897390g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9271818g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_9762162g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g03220.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp4g19320.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g18700.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g05111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29597 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g39111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16598 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g22861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g24927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g31192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g21469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60781 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000026 No alias not classified & original description: CDS=1-1638 0.03 OrthoFinder output from all 47 species
Solyc01g109250.2.1 Solyc01g109250 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc02g089990.1.1 Solyc02g089990 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc02g091180.1.1 Solyc02g091180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g007580.1.1 Solyc04g007580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g082960.1.1 Solyc04g082960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g007370.1.1 Solyc06g007370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g02969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06542 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g09985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18211 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g40331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005612_P001 Zm00001e005612 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e011957_P001 Zm00001e011957 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e020136_P001 Zm00001e020136 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e026461_P001 Zm00001e026461 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030501_P001 Zm00001e030501 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e038350_P001 Zm00001e038350 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e042459_P001 Zm00001e042459 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 1 163
No external refs found!