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  5. LOC_Os01g16900.1

LOC_Os01g16900.1 (IDH-V, LOC_Os01g16900)


Aliases : IDH-V, LOC_Os01g16900

Description : catalytic component of isocitrate dehydrogenase heterodimer


Gene families : OG0001093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g16900.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT3G09810 IDH-VI isocitrate dehydrogenase VI 0.03 OrthoFinder output from all 47 species
AT4G35260 IDH-I, IDH1 isocitrate dehydrogenase 1 0.05 OrthoFinder output from all 47 species
Ala_g03902 IDH-I, IDH1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aop_g01698 IDH-III EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Cre02.g143250 IDH-VI Cellular respiration.tricarboxylic acid cycle.isocitrate... 0.03 OrthoFinder output from all 47 species
Cre17.g728800 IDH-I, IDH1 Cellular respiration.tricarboxylic acid cycle.isocitrate... 0.03 OrthoFinder output from all 47 species
Len_g07530 IDH-V EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Mp1g26630.1 IDH-V catalytic component of isocitrate dehydrogenase heterodimer 0.03 OrthoFinder output from all 47 species
Nbi_g04744 IDH-V EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020706 IDH-V EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Solyc08g077920.3.1 IDH-V, Solyc08g077920 catalytic component of isocitrate dehydrogenase heterodimer 0.04 OrthoFinder output from all 47 species
Solyc08g077930.3.1 IDH-V, Solyc08g077930 catalytic component of isocitrate dehydrogenase heterodimer 0.03 OrthoFinder output from all 47 species
Solyc10g074500.2.1 IDH-I, IDH1,... regulatory component of isocitrate dehydrogenase heterodimer 0.04 OrthoFinder output from all 47 species
Spa_g15043 IDH-V EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Zm00001e025490_P003 IDH-V, Zm00001e025490 catalytic component of isocitrate dehydrogenase heterodimer 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024084 IsoPropMal-DH-like_dom 35 358
No external refs found!