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  5. LOC_Os01g12020.1

LOC_Os01g12020.1 (LOC_Os01g12020)


Aliases : LOC_Os01g12020

Description : no hits & (original description: none)


Gene families : OG0000407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000407_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g12020.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00101310 evm_27.TU.AmTr_v1... Putative non-specific lipid-transfer protein 14... 0.05 OrthoFinder output from all 47 species
AMTR_s00077p00066810 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein OS=Malus domestica 0.03 OrthoFinder output from all 47 species
AMTR_s00092p00020690 LTP5,... Non-specific lipid-transfer protein A OS=Ricinus communis 0.02 OrthoFinder output from all 47 species
AMTR_s00162p00022020 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00162p00083730 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G18370 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G38530 LP2, cdf3, LTP2 lipid transfer protein 2 0.05 OrthoFinder output from all 47 species
AT2G38540 LTP1, ATLTP1, LP1 lipid transfer protein 1 0.03 OrthoFinder output from all 47 species
AT3G51590 LTP12 lipid transfer protein 12 0.07 OrthoFinder output from all 47 species
AT4G28395 ATA7, A7 Bifunctional inhibitor/lipid-transfer protein/seed... 0.07 OrthoFinder output from all 47 species
AT4G28397 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.07 OrthoFinder output from all 47 species
AT4G33355 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT5G44265 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT5G59310 LTP4 lipid transfer protein 4 0.03 OrthoFinder output from all 47 species
AT5G62065 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
Aspi01Gene08094.t1 LTP4, Aspi01Gene08094 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08097.t1 LTP12, Aspi01Gene08097 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08117.t1 LTP4, Aspi01Gene08117 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08118.t1 LTP4, Aspi01Gene08118 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28784.t1 LTP4, Aspi01Gene28784 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36893.t1 Aspi01Gene36893 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene36901.t1 Aspi01Gene36901 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0011.g012608 No alias not classified & original description: CDS=9-443 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023749 No alias not classified & original description: CDS=100-516 0.02 OrthoFinder output from all 47 species
Azfi_s0198.g057421 No alias not classified & original description: CDS=1-438 0.02 OrthoFinder output from all 47 species
Ceric.02G006400.1 Ceric.02G006400 not classified & original description: pacid=50584115... 0.04 OrthoFinder output from all 47 species
Ceric.02G006500.1 Ceric.02G006500 not classified & original description: pacid=50583964... 0.03 OrthoFinder output from all 47 species
Ceric.11G012100.1 Ceric.11G012100 not classified & original description: pacid=50596478... 0.02 OrthoFinder output from all 47 species
Ceric.13G061000.1 Ceric.13G061000 not classified & original description: pacid=50635883... 0.02 OrthoFinder output from all 47 species
Ceric.13G068200.1 Ceric.13G068200 not classified & original description: pacid=50636227... 0.05 OrthoFinder output from all 47 species
Ceric.1Z037200.1 Ceric.1Z037200 not classified & original description: pacid=50567729... 0.02 OrthoFinder output from all 47 species
Ceric.23G011200.1 Ceric.23G011200 not classified & original description: pacid=50610925... 0.03 OrthoFinder output from all 47 species
Ceric.30G041500.1 LTP1, ATLTP1,... not classified & original description: pacid=50608788... 0.03 OrthoFinder output from all 47 species
Dac_g19696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25121 LTP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37886 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g48712 LTP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15981 LTP1, ATLTP1, LP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29180 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g29763 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g15056 LTP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24012 LTP12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24013 LP2, cdf3, LTP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24014 LP2, cdf3, LTP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29676 LP2, cdf3, LTP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006001001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01010603001 No alias Putative non-specific lipid-transfer protein 14... 0.05 OrthoFinder output from all 47 species
GSVIVT01030190001 No alias Non-specific lipid-transfer protein P5 OS=Vitis sp. 0.02 OrthoFinder output from all 47 species
Gb_20253 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_20254 No alias Non-specific lipid-transfer protein OS=Gerbera hybrida... 0.03 OrthoFinder output from all 47 species
Gb_20255 No alias Non-specific lipid-transfer protein OS=Gerbera hybrida... 0.03 OrthoFinder output from all 47 species
Gb_23000 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_25561 LTP3 Non-specific lipid-transfer protein 4 (Fragment) OS=Lens... 0.02 OrthoFinder output from all 47 species
Gb_41630 No alias Non-specific lipid-transfer protein 4.1 OS=Hordeum... 0.02 OrthoFinder output from all 47 species
LOC_Os01g60740.1 LOC_Os01g60740 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g59380.1 LOC_Os03g59380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g34840.1 LOC_Os06g34840 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g02350.1 LOC_Os11g02350 Non-specific lipid-transfer protein 3 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
LOC_Os11g02369.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2A OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os12g02300.1 LOC_Os12g02300 Non-specific lipid-transfer protein 3 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Len_g59234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10379473g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10432090g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10434303g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.02 OrthoFinder output from all 47 species
MA_110959g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_128304g0010 No alias Non-specific lipid-transfer protein 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_18806g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_355839g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_422961g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_50251g0010 No alias Non-specific lipid-transfer protein OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
MA_5482715g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_58978g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.04 OrthoFinder output from all 47 species
MA_6565643g0010 LTP4 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.03 OrthoFinder output from all 47 species
MA_6905336g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_7609080g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_81028g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8724326g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9589878g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g22339 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06659 LTP6 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019322 No alias not classified & original description: CDS=195-662 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019327 No alias not classified & original description: CDS=54-425 0.04 OrthoFinder output from all 47 species
Solyc01g081600.3.1 LTP4, Solyc01g081600 Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.02 OrthoFinder output from all 47 species
Solyc01g090360.3.1 Solyc01g090360 Non-specific lipid-transfer protein 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc01g095780.2.1 Solyc01g095780 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc02g087910.3.1 Solyc02g087910 Non-specific lipid-transfer protein B OS=Ricinus... 0.03 OrthoFinder output from all 47 species
Solyc03g026090.4.1 Solyc03g026090 Putative non-specific lipid-transfer protein 14... 0.12 OrthoFinder output from all 47 species
Solyc06g059790.4.1 Solyc06g059790 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc08g067500.1.1 Solyc08g067500 no description available(sp|a0a2j6kl39|nltp_lacsa : 85.1) 0.03 OrthoFinder output from all 47 species
Solyc08g067510.1.1 LTP3, Solyc08g067510 no description available(sp|a0a2j6kl39|nltp_lacsa : 101.0) 0.02 OrthoFinder output from all 47 species
Solyc10g012110.3.1 Solyc10g012110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g012120.1.1 Solyc10g012120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g075060.2.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.04 OrthoFinder output from all 47 species
Solyc10g075090.3.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Solyc10g075100.2.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc10g075103.1.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Solyc10g075107.1.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 2 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc10g075110.2.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 1 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Spa_g35078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30304 LTP5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g40525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019437_P001 Zm00001e019437 Non-specific lipid-transfer protein 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e026064_P001 Zm00001e026064 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e037122_P001 Zm00001e037122 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 32 118
No external refs found!