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  5. LOC_Os01g11430.1

LOC_Os01g11430.1 (LOC_Os01g11430)


Aliases : LOC_Os01g11430

Description : transcriptional repressor (TIE/SPL)


Gene families : OG0008373 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g11430.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Aob_g41769 No alias transcriptional repressor *(TIE/SPL) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g68759 No alias transcriptional repressor *(TIE/SPL) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38835 No alias transcriptional repressor *(TIE/SPL) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016475_P006 Zm00001e016475 transcriptional repressor (TIE/SPL) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0046373 L-arabinose metabolic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!