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  5. LOC_Os01g11414.1

LOC_Os01g11414.1 (LOC_Os01g11414)


Aliases : LOC_Os01g11414

Description : cation exchanger (NCL/EF-CAX)


Gene families : OG0000757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000757_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g11414.1

Target Alias Description ECC score Gene Family Method Actions
AT2G34020 No alias Calcium-binding EF-hand family protein 0.03 OrthoFinder output from all 47 species
Ala_g21646 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25726 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020663001 No alias Solute transport.carrier-mediated transport.CDF... 0.02 OrthoFinder output from all 47 species
GSVIVT01021164001 No alias Solute transport.carrier-mediated transport.CDF... 0.03 OrthoFinder output from all 47 species
Len_g16412 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g03300.1 No alias cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Ppi_g59906 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13051 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g077270.4.1 Solyc02g077270 cation exchanger (NCL/EF-CAX) 0.03 OrthoFinder output from all 47 species
Solyc03g006260.4.1 Solyc03g006260 cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species
Solyc04g039960.4.1 Solyc04g039960 Sodium/calcium exchanger NCL2 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Spa_g14686 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51259 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09007 No alias cation exchanger *(NCL/EF-CAX) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026032_P005 Zm00001e026032 cation exchanger (NCL/EF-CAX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 432 575
IPR004837 NaCa_Exmemb 89 266
No external refs found!