1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g10870.1

LOC_Os01g10870.1 (WL4, SnRK3.9, CIPK12,...)


Aliases : WL4, SnRK3.9, CIPK12, ATWL4, LOC_Os01g10870

Description : SNF1-related protein kinase (SnRK3)


Gene families : OG0000065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g10870.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT1G01140 SnRK3.12, PKS6, CIPK9 CBL-interacting protein kinase 9 0.02 OrthoFinder output from all 47 species
AT2G30360 PKS5, SNRK3.22,... SOS3-interacting protein 4 0.02 OrthoFinder output from all 47 species
AT4G14580 SnRK3.3, CIPK4 CBL-interacting protein kinase 4 0.02 OrthoFinder output from all 47 species
AT5G45820 PKS18, CIPK20, SnRK3.6 CBL-interacting protein kinase 20 0.01 OrthoFinder output from all 47 species
Adi_g009461 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Adi_g013142 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Adi_g013144 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Adi_g056775 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Adi_g086214 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Adi_g109239 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ala_g02126 KIN10, SNRK1.1, AKIN10 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Als_g19210 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Als_g24215 KIN10, SNRK1.1, AKIN10 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Als_g38122 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Als_g48801 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Als_g52523 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Aob_g20875 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Aop_g08330 KIN10, SNRK1.1, AKIN10 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Aop_g09796 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03541.t1 KIN10, SNRK1.1,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Aspi01Gene42277.t1 SnRK3.12, PKS6,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Aspi01Gene48391.t1 CIPK3, SnRK3.17,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014967 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Azfi_s0222.g058772 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Cba_g04526 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Cba_g57988 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ceric.05G081700.1 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Ceric.25G059800.1 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Ceric.39G024200.1 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000073.33 KIN10, SNRK1.1, AKIN10 Multi-process regulation.SnRK1 metabolic regulator... 0.01 OrthoFinder output from all 47 species
Dac_g08061 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dac_g09883 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dac_g13626 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dac_g23582 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Dac_g28647 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dac_g46059 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dcu_g06238 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Dcu_g41142 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Dde_g02879 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Dde_g03849 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Dde_g30131 KIN10, SNRK1.1, AKIN10 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ehy_g07587 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ehy_g19293 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ehy_g19472 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ehy_g21768 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
GSVIVT01017690001 CIPK1, SnRK3.16 Protein modification.phosphorylation.CAMK kinase... 0.04 OrthoFinder output from all 47 species
GSVIVT01024583001 PKS5, SNRK3.22,... CBL-interacting serine/threonine-protein kinase 11... 0.02 OrthoFinder output from all 47 species
GSVIVT01032708001 PKS2, CIPK10,... CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Gb_00014 No alias CBL-interacting protein kinase 5 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Gb_16900 PKS18, CIPK20, SnRK3.6 SNF1-related protein kinase (SnRK3) 0.02 OrthoFinder output from all 47 species
Gb_28009 WL4, SnRK3.9,... SNF1-related protein kinase (SnRK3) 0.03 OrthoFinder output from all 47 species
Gb_28012 WL4, SnRK3.9,... SNF1-related protein kinase (SnRK3) 0.03 OrthoFinder output from all 47 species
LOC_Os08g34240.1 CIPK6, SIP3,... SNF1-related protein kinase (SnRK3) 0.03 OrthoFinder output from all 47 species
LOC_Os09g25090.1 SnRK3.25,... SNF1-related protein kinase (SnRK3) 0.05 OrthoFinder output from all 47 species
Len_g02797 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Len_g05307 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Len_g33072 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Len_g48853 KIN10, SNRK1.1, AKIN10 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Len_g56031 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
MA_10430528g0010 PKS18, CIPK20, SnRK3.6 SNF1-related protein kinase (SnRK3) 0.04 OrthoFinder output from all 47 species
MA_269680g0010 No alias SNF1-related protein kinase (SnRK3) 0.02 OrthoFinder output from all 47 species
MA_31203g0010 SnRK3.23,... SNF1-related protein kinase (SnRK3) 0.05 OrthoFinder output from all 47 species
MA_70100g0010 SnRK3.12, PKS6, CIPK9 SNF1-related protein kinase (SnRK3) 0.04 OrthoFinder output from all 47 species
MA_819000g0010 No alias SNF1-related protein kinase (SnRK3) 0.02 OrthoFinder output from all 47 species
MA_9913196g0010 PKS18, CIPK20, SnRK3.6 SNF1-related protein kinase (SnRK3) 0.05 OrthoFinder output from all 47 species
Mp6g18720.1 KIN10, SNRK1.1, AKIN10 catalytic subunit alpha of SNF1-related SnRK1 protein... 0.03 OrthoFinder output from all 47 species
Msp_g01134 ATCIPK8, CIPK8,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Msp_g03501 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Msp_g08020 KIN10, SNRK1.1, AKIN10 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Nbi_g11113 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Nbi_g15819 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Nbi_g18804 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ore_g15865 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ore_g34486 SNRK1.2, AKIN11,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Pir_g36907 ATSR1, CIPK14,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Pir_g40550 KIN10, SNRK1.1, AKIN10 EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Pnu_g10225 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Pnu_g12102 SnRK3.12, PKS6, CIPK9 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Pnu_g27727 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Ppi_g05048 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ppi_g06346 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ppi_g16246 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001339 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Solyc02g072540.3.1 PKS18, CIPK20,... SNF1-related protein kinase (SnRK3) 0.03 OrthoFinder output from all 47 species
Solyc03g005330.1.1 ATSRPK1,... CBL-interacting serine/threonine-protein kinase 7... 0.02 OrthoFinder output from all 47 species
Solyc12g098910.2.1 CIPK1, SnRK3.16,... SNF1-related protein kinase (SnRK3) 0.04 OrthoFinder output from all 47 species
Spa_g18228 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Spa_g25501 SnRK3.23,... EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Tin_g25531 CIPK3, SnRK3.17 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Zm00001e000192_P003 SnRK3.12, PKS6,... SNF1-related protein kinase (SnRK3) 0.04 OrthoFinder output from all 47 species
Zm00001e001502_P003 Zm00001e001502 SNF1-related protein kinase (SnRK3) 0.03 OrthoFinder output from all 47 species
Zm00001e001595_P001 PKS2, CIPK10,... SNF1-related protein kinase (SnRK3) 0.02 OrthoFinder output from all 47 species
Zm00001e010838_P003 CIPK1, SnRK3.16,... SNF1-related protein kinase (SnRK3) 0.02 OrthoFinder output from all 47 species
Zm00001e018059_P001 ATSRPK1,... CBL-interacting protein kinase 4 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e019428_P001 CIPK2, SnRK3.2,... SNF1-related protein kinase (SnRK3) 0.01 OrthoFinder output from all 47 species
Zm00001e022467_P001 CIPK6, SIP3,... SNF1-related protein kinase (SnRK3) 0.04 OrthoFinder output from all 47 species
Zm00001e023967_P001 CIPK2, SnRK3.2,... SNF1-related protein kinase (SnRK3) 0.02 OrthoFinder output from all 47 species
Zm00001e034151_P001 SnRK3.25,... SNF1-related protein kinase (SnRK3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 25 279
IPR004041 NAF_dom 362 430
No external refs found!