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  5. LOC_Os01g10320.1

LOC_Os01g10320.1 (ICU4, ATHB15,...)


Aliases : ICU4, ATHB15, ATHB-15, CNA, LOC_Os01g10320

Description : transcription factor (HD-ZIP III)


Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g10320.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00155p00069240 PHB-1D, ATHB-14,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
AT4G32880 HB-8, ATHB8, ATHB-8 homeobox gene 8 0.03 OrthoFinder output from all 47 species
Adi_g058743 IFL1, IFL, REV HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060168 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g34188 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27214.t1 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008557 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original... 0.02 OrthoFinder output from all 47 species
Cba_g22008 HB-8, ATHB8, ATHB-8 transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22860 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g38205 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11576 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12681 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20524 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017010001 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01035612001 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
Gb_22761 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.02 OrthoFinder output from all 47 species
LOC_Os06g50724.1 ICU4, ATHB15,... Homeobox-leucine zipper protein HOX29 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Len_g10271 HB-8, ATHB8, ATHB-8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19220 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26487 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435903g0010 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
MA_10435903g0020 ICU4, ATHB15,... Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_41083g0010 PHV, ATHB9 pepsin-type protease 0.03 OrthoFinder output from all 47 species
Pnu_g24960 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26446 PHB-1D, ATHB-14,... transcriptional co-regulator *(ZPR) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013507 PHV, ATHB9 not classified & original description: CDS=1-966 0.03 OrthoFinder output from all 47 species
Sam_g10819 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39110 No alias HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR013978 MEKHLA 490 635
IPR002913 START_lipid-bd_dom 2 154
No external refs found!