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  5. LOC_Os01g10290.1

LOC_Os01g10290.1 (ATG3, ATATG3, LOC_Os01g10290)


Aliases : ATG3, ATATG3, LOC_Os01g10290

Description : ATG3 autophagosome ATG8-conjugation E2 protein


Gene families : OG0004602 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g10290.1

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene28617.t1 ATG3, ATATG3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02102 ATG3, ATATG3 autophagosome E2 ATG8-ubiquitin-conjugating enzyme... 0.03 OrthoFinder output from all 47 species
Len_g11974 ATG3, ATATG3 autophagosome E2 ATG8-ubiquitin-conjugating enzyme... 0.04 OrthoFinder output from all 47 species
Lfl_g05969 ATG3, ATATG3 autophagosome E2 ATG8-ubiquitin-conjugating enzyme... 0.03 OrthoFinder output from all 47 species
Sam_g29084 No alias autophagosome E2 ATG8-ubiquitin-conjugating enzyme... 0.02 OrthoFinder output from all 47 species
Smo97230 ATG3, ATATG3 Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.03 OrthoFinder output from all 47 species
Solyc06g034160.3.1 ATG3, ATATG3,... ATG3 autophagosome ATG8-conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Zm00001e037871_P001 ATG3, ATATG3,... ATG3 autophagosome ATG8-conjugation E2 protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR007135 Atg3/Atg10 201 262
No external refs found!