LOC_Os01g10260.1 (LOC_Os01g10260)


Aliases : LOC_Os01g10260

Description : no hits & (original description: none)


Gene families : OG0000771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000771_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g10260.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00017060 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00245950 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G79770 No alias Protein of unknown function (DUF1677) 0.01 OrthoFinder output from all 47 species
AT5G25840 No alias Protein of unknown function (DUF1677) 0.02 OrthoFinder output from all 47 species
Aev_g01868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26438.t1 Aspi01Gene26438 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G040700.1 Ceric.03G040700 not classified & original description: pacid=50571909... 0.02 OrthoFinder output from all 47 species
GSVIVT01017006001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_05755 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g54170.1 LOC_Os01g54170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_23866g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g00950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g122300.3.1 Solyc03g122300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g061270.1.1 Solyc08g061270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g082190.1.1 Solyc09g082190 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g02634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005661_P001 Zm00001e005661 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e031344_P001 Zm00001e031344 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 81 176
No external refs found!