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  5. LOC_Os01g09760.1

LOC_Os01g09760.1 (ATALY3, ALY3, LOC_Os01g09760)


Aliases : ATALY3, ALY3, LOC_Os01g09760

Description : transcription factor (MYB-related)


Gene families : OG0002386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g09760.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Aev_g18127 ATALY3, ALY3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10918 ATALY3, ALY3 MYB-RELATED transcription factor *(ALY) & original... 0.02 OrthoFinder output from all 47 species
Sam_g07918 No alias MYB-RELATED transcription factor *(ALY) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e041708_P001 ATALY3, ALY3,... transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006906 vesicle fusion IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048280 vesicle fusion with Golgi apparatus IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0061025 membrane fusion IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090174 organelle membrane fusion IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR033471 DIRP 486 586
IPR001005 SANT/Myb 46 79
No external refs found!