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  5. LOC_Os01g05420.1

LOC_Os01g05420.1 (ATIWS1, IWS1, LOC_Os01g05420)


Aliases : ATIWS1, IWS1, LOC_Os01g05420

Description : component IWS1 of SPT6-IWS1 transcription elongation complex


Gene families : OG0004677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g05420.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Ala_g10235 ATIWS1, IWS1 component *(IWS1) of SPT6-IWS1 transcription elongation... 0.02 OrthoFinder output from all 47 species
Ppi_g56168 ATIWS1, IWS1 component *(IWS1) of SPT6-IWS1 transcription elongation... 0.02 OrthoFinder output from all 47 species
Solyc06g066320.3.1 ATIWS1, IWS1,... component IWS1 of SPT6-IWS1 transcription elongation complex 0.05 OrthoFinder output from all 47 species
Zm00001e016922_P001 ATIWS1, IWS1,... component IWS1 of SPT6-IWS1 transcription elongation complex 0.04 OrthoFinder output from all 47 species
Zm00001e025802_P001 ATIWS1, IWS1,... component IWS1 of SPT6-IWS1 transcription elongation complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004864 protein phosphatase inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019212 phosphatase inhibitor activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 358 403
No external refs found!