LOC_Os01g03840.1 (JAG, LOC_Os01g03840)


Aliases : JAG, LOC_Os01g03840

Description : Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica (sp|q9lg97|sl1_orysj : 328.0)


Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g03840.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00194700 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AMTR_s00024p00186840 GIS,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G42410 ZFP11, ATZFP11 zinc finger protein 11 0.04 OrthoFinder output from all 47 species
AT3G23130 SUP, FLO10, FON1 C2H2 and C2HC zinc fingers superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g009388 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g025780 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g055703 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g058601 ZFP3 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g079264 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g00894 ZFP3 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g06187 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g20041 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56786.t1 Aspi01Gene56786 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63795.t1 Aspi01Gene63795 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0065.g035758 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.08G040400.1 ZFP7, Ceric.08G040400 C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.16G000500.1 RAB, RBE, Ceric.16G000500 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G037400.1 ZFP10, ATZFP10,... C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g15821 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g31422 ZFP6 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g00776 ZFP3 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g13421 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01009401001 ZFP7 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01027719001 SUP, FLO10, FON1 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
Gb_04808 JGL, NUB no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g44190.1 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Msp_g09287 No alias C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Msp_g10324 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g14288 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g11810 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g15065 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g21934 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Sam_g14667 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g060420.2.1 ZFP6, Solyc01g060420 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc08g077000.1.1 Solyc08g077000 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc09g089590.1.1 SUP, FLO10,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Solyc10g080600.3.1 GIS, Solyc10g080600 C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Spa_g21690 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g53718 ZFP11, ATZFP11 C2H2 subclass ZFP transcription factor & original... 0.05 OrthoFinder output from all 47 species
Zm00001e013379_P001 ZFP11, ATZFP11,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e017030_P002 JAG, Zm00001e017030 Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e034883_P001 ATZFP2, ZFP2,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e036220_P001 ZFP8, Zm00001e036220 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!