1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g01280.1

LOC_Os01g01280.1 (LOC_Os01g01280)


Aliases : LOC_Os01g01280

Description : Thylakoid lumenal 17.9 kDa protein, chloroplastic OS=Arabidopsis thaliana (sp|q9sw33|tl1y_arath : 147.0)


Gene families : OG0007188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007188_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g01280.1

Target Alias Description ECC score Gene Family Method Actions
AT4G24930 No alias thylakoid lumenal 17.9 kDa protein, chloroplast 0.03 OrthoFinder output from all 47 species
Azfi_s0280.g062278 No alias not classified & original description: CDS=1-762 0.05 OrthoFinder output from all 47 species
Dde_g05717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025614_P001 Zm00001e025614 Thylakoid lumenal 17.9 kDa protein, chloroplastic... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA

No InterPro domains available for this sequence

No external refs found!