ChrSy.fgenesh.mRNA.77

Description : no hits & (original description: none)

Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ChrSy.fgenesh.mRNA.77
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
Aev_g27113	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g32156	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene60389.t1	Aspi01Gene60389	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g33465	ORF158	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g33782	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g68986	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.48	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.06	OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.5	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Gb_11641	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.02	OrthoFinder output from all 47 species
Gb_13712	No alias	RNA-directed DNA polymerase homolog OS=Oenothera...	0.02	OrthoFinder output from all 47 species
Gb_24609	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Pir_g19156	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	endoribonuclease activity	None	Extended
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEA	Interproscan
MF	GO:0004540	ribonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006259	DNA metabolic process	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0015074	DNA integration	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002156	RNaseH_domain	913	986
IPR005162	Retrotrans_gag_dom	300	390
IPR041373	RT_RNaseH	774	863

External Links

No external refs found!