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  5. ChrSy.fgenesh.mRNA.64

ChrSy.fgenesh.mRNA.64


Description : no hits & (original description: none)


Gene families : OG0000111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ChrSy.fgenesh.mRNA.64
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Adi_g013625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05848 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36439.t1 Aspi01Gene36439 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g21255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G034000.1 Ceric.27G034000 not classified & original description: pacid=50605588... 0.02 OrthoFinder output from all 47 species
Gb_11216 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_33422 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g25599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 222 330
No external refs found!