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  5. MA_97627g0010

MA_97627g0010


Description : Chaperonin 60 subunit beta 2, chloroplastic OS=Arabidopsis thaliana (sp|q9lje4|cpnb2_arath : 593.0)


Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_97627g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00080200 CH-CPN60A,... External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
AMTR_s00062p00185880 CH-CPN60A,... External stimuli response.temperature.Hsp... 0.05 OrthoFinder output from all 47 species
AMTR_s00106p00119930 CPN60B, LEN1,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.03 OrthoFinder output from all 47 species
AT2G28000 CH-CPN60A, CPN60A, SLP chaperonin-60alpha 0.03 OrthoFinder output from all 47 species
Adi_g008941 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013083 No alias chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g013893 CH-CPN60A, CPN60A, SLP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058751 CH-CPN60A, CPN60A, SLP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g114645 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09249 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07890 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08982 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000356 No alias chaperone *(Hsp60) & original description: CDS=314-2140 0.02 OrthoFinder output from all 47 species
Azfi_s0018.g014863 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: CDS=124-1707 0.03 OrthoFinder output from all 47 species
Azfi_s0217.g058536 CPN60B, LEN1 chaperone *(Hsp60) & original description: CDS=281-2059 0.03 OrthoFinder output from all 47 species
Cba_g03270 No alias chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03991 No alias chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G040000.1 Ceric.21G040000 chaperone *(Hsp60) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.32G022500.1 CPN60B, LEN1,... chaperone *(Hsp60) & original description:... 0.05 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.28 No alias subunit beta of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species
Cre04.g231222 CH-CPN60A, CPN60A, SLP External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.01 OrthoFinder output from all 47 species
Cre17.g741450 CPN60B, LEN1 External stimuli response.temperature.Hsp... 0.01 OrthoFinder output from all 47 species
Dac_g15356 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15357 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03921 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08839 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19819 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03882 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07618 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g08062 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08451 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010149001 No alias External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
GSVIVT01012098001 EMB3007 External stimuli response.temperature.Hsp... 0.07 OrthoFinder output from all 47 species
GSVIVT01017032001 No alias External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
GSVIVT01025490001 No alias External stimuli response.temperature.Hsp... 0.05 OrthoFinder output from all 47 species
GSVIVT01031526001 CH-CPN60A, CPN60A, SLP External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
Gb_25193 No alias RuBisCO large subunit-binding protein subunit beta,... 0.02 OrthoFinder output from all 47 species
LOC_Os06g02380.2 CPN60B, LEN1,... subunit beta of Cpn60 chaperonin complex. component... 0.04 OrthoFinder output from all 47 species
LOC_Os09g38980.1 EMB3007, LOC_Os09g38980 subunit alpha of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species
Len_g11554 No alias chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g45333 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g59695 CPN60B, LEN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g20470.1 CH-CPN60A, CPN60A, SLP subunit alpha of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species
Msp_g08431 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13552 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30013 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g08643 No alias chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15384 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06617 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c16_4660V3.1 CPN60B, LEN1, Pp3c16_4660 chaperonin 60 beta 0.01 OrthoFinder output from all 47 species
Pp3c24_12180V3.1 CH-CPN60A,... chaperonin-60alpha 0.02 OrthoFinder output from all 47 species
Ppi_g14667 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40159 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56884 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12248 No alias chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g15739 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39492 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Smo165043 No alias External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Smo168153 CPN60B, LEN1 External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Solyc01g028810.3.1 Solyc01g028810 subunit beta of Cpn60 chaperonin complex. component... 0.06 OrthoFinder output from all 47 species
Solyc11g069790.2.1 CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
Spa_g09931 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g10311 CPN60B, LEN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26363 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38972 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54235 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06608 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06882 No alias chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001025_P002 Zm00001e001025 subunit beta of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species
Zm00001e029825_P001 CPN60B, LEN1,... subunit beta of Cpn60 chaperonin complex. component... 0.06 OrthoFinder output from all 47 species
Zm00001e031536_P001 CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
Zm00001e036666_P003 Zm00001e036666 subunit beta of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
Zm00001e037002_P001 CH-CPN60A,... Chaperonin 60 subunit alpha 1, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 38 393
IPR002423 Cpn60/GroEL/TCP-1 578 671
No external refs found!